RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 IRX4P78413 519 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 G2E3Q7L622 706 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 CCDC105Q8IYK2 499 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 ARHGEF2Q92974 986 aaKnown RBP22.29■■□□□ 1.16
RNF40-203ENST00000493683 TACC3Q9Y6A5 838 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 SH2D4BQ5SQS7 431 aa22.28■■□□□ 1.16
RNF40-203ENST00000493683 FAM227BQ96M60 508 aa22.28■■□□□ 1.16
RNF40-203ENST00000493683 IL13P35225 146 aa22.28■■□□□ 1.16
RNF40-203ENST00000493683 CDC37L1Q7L3B6 337 aa22.28■■□□□ 1.16
RNF40-203ENST00000493683 DCUN1D2Q6PH85 259 aa22.28■■□□□ 1.16
RNF40-203ENST00000493683 KLHL7Q8IXQ5 586 aa22.28■■□□□ 1.16
RNF40-203ENST00000493683 TRAPPC8Q9Y2L5 1435 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 DAPK3O43293 454 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 EXOC3O60645 756 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 IGSF3O75054 1194 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 ATP5JP18859 108 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 NCAPH2Q6IBW4 605 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 SLF1Q9BQI6 1058 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 BEND3Q5T5X7 828 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 OR8K1Q8NGG5 319 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 C8orf37Q96NL8 207 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 CA8P35219 290 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 BRDTQ58F21 947 aaPredicted RBP22.27■■□□□ 1.16
RNF40-203ENST00000493683 CCDC125Q86Z20 511 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 CEP120Q8N960 986 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 OTUD7AQ8TE49 926 aaPredicted RBP22.27■■□□□ 1.16
RNF40-203ENST00000493683 ATP2A3Q93084 1043 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 AMFRQ9UKV5 643 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 TRIM37O94972 964 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 ANKRD20A3Q5VUR7 823 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 MAPK8IP1Q9UQF2 711 aa22.27■■□□□ 1.16
RNF40-203ENST00000493683 ZNF500O60304 480 aaPredicted RBP22.26■■□□□ 1.15
RNF40-203ENST00000493683 APBA1Q02410 837 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 ATP10BO94823 1461 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 KRT71Q3SY84 523 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 GRK7Q8WTQ7 553 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 KIAA1468Q9P260 1216 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 SAP30BPQ9UHR5 308 aaKnown RBP22.26■■□□□ 1.15
RNF40-203ENST00000493683 HYOU1Q9Y4L1 999 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 KRT15P19012 456 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 HOMER3Q9NSC5 361 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 CHMP2AO43633 222 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 TROVE2P10155 538 aaKnown RBP eCLIP22.26■■□□□ 1.15
RNF40-203ENST00000493683 MYSM1Q5VVJ2 828 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 RNF10Q8N5U6 811 aaKnown RBP22.26■■□□□ 1.15
RNF40-203ENST00000493683 CNBD1Q8NA66 436 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 RAB3IPQ96QF0 476 aaPredicted RBP22.26■■□□□ 1.15
RNF40-203ENST00000493683 PFDN4Q9NQP4 134 aa22.26■■□□□ 1.15
RNF40-203ENST00000493683 RNF34Q969K3 372 aa22.25■■□□□ 1.15
RNF40-203ENST00000493683 TRIM31Q9BZY9 425 aa22.25■■□□□ 1.15
RNF40-203ENST00000493683 XPO4Q9C0E2 1151 aaKnown RBP22.25■■□□□ 1.15
RNF40-203ENST00000493683 EFCAB8A8MWE9 144 aa22.25■■□□□ 1.15
RNF40-203ENST00000493683 HMGB1P1B2RPK0 211 aaPredicted RBP22.25■■□□□ 1.15
RNF40-203ENST00000493683 FAM89AQ96GI7 184 aa22.25■■□□□ 1.15
RNF40-203ENST00000493683 MRFAP1L1Q96HT8 127 aa22.25■■□□□ 1.15
RNF40-203ENST00000493683 MYCT1Q8N699 235 aa22.25■■□□□ 1.15
RNF40-203ENST00000493683 GADD45BO75293 160 aaPredicted RBP22.25■■□□□ 1.15
RNF40-203ENST00000493683 RNASE9P60153 205 aaKnown RBP22.25■■□□□ 1.15
RNF40-203ENST00000493683 GGA1Q9UJY5 639 aa22.25■■□□□ 1.15
RNF40-203ENST00000493683 UFL1O94874 794 aa22.24■■□□□ 1.15
RNF40-203ENST00000493683 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
RNF40-203ENST00000493683 PNMA8AQ86V59 439 aaPredicted RBP22.24■■□□□ 1.15
RNF40-203ENST00000493683 GOLGA5Q8TBA6 731 aa22.24■■□□□ 1.15
RNF40-203ENST00000493683 DNM2P50570 870 aa22.24■■□□□ 1.15
RNF40-203ENST00000493683 SPATA5Q8NB90 893 aa22.24■■□□□ 1.15
RNF40-203ENST00000493683 ARPP21Q9UBL0 812 aaPredicted RBP22.24■■□□□ 1.15
RNF40-203ENST00000493683 RIMBP2O15034 1052 aa22.24■■□□□ 1.15
RNF40-203ENST00000493683 REXO1Q8N1G1 1221 aaKnown RBP22.24■■□□□ 1.15
RNF40-203ENST00000493683 E7EWF7 191 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 HARSP12081 509 aaKnown RBP22.23■■□□□ 1.15
RNF40-203ENST00000493683 TCP1P17987 556 aaKnown RBP22.23■■□□□ 1.15
RNF40-203ENST00000493683 HAUS4Q9H6D7 363 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 MED4Q9NPJ6 270 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 RGS16O15492 202 aaPredicted RBP22.23■■□□□ 1.15
RNF40-203ENST00000493683 N4BP1O75113 896 aaKnown RBP22.23■■□□□ 1.15
RNF40-203ENST00000493683 SP4Q02446 784 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 GALNT17Q6IS24 598 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 FAM173BQ6P4H8 233 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 MRPL44Q9H9J2 332 aaKnown RBP22.23■■□□□ 1.15
RNF40-203ENST00000493683 PICK1Q9NRD5 415 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 SLC1A4P43007 532 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 GCKRQ14397 625 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 TEKT1Q969V4 418 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 PPP1R12CQ9BZL4 782 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 DDX41Q9UJV9 622 aaKnown RBP22.23■■□□□ 1.15
RNF40-203ENST00000493683 P4HA1P13674 534 aa22.23■■□□□ 1.15
RNF40-203ENST00000493683 PHBP35232 272 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 NSMCE1Q8WV22 266 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 GCNT3O95395 438 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 RBM6P78332 1123 aaKnown RBP22.22■■□□□ 1.15
RNF40-203ENST00000493683 LONRF2Q1L5Z9 754 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 PHLDB3Q6NSJ2 640 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 RRAGAQ7L523 313 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 CCDC89Q8N998 374 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 ATP8A2Q9NTI2 1148 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 STAT1P42224 750 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 BLMP54132 1417 aaPredicted RBP22.22■■□□□ 1.15
RNF40-203ENST00000493683 TBC1D22AQ8WUA7 517 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 SUCLG2Q96I99 432 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms