RNA–Protein interactions for RNA: ENST00000493085.5

GPM6B-209, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-209ENST00000493085 GUCY1A2P33402 732 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 USP14P54578 494 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 IRX3P78415 501 aaPredicted RBP12.49□□□□□ -0.41
GPM6B-209ENST00000493085 CAP1Q01518 475 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 CCDC129Q6ZRS4 1044 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 TICAM2Q86XR7 235 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 IFNL3Q8IZI9 196 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 STK11IPQ8N1F8 1099 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 NAPBQ9H115 298 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 ASCC2Q9H1I8 757 aaPredicted RBP12.49□□□□□ -0.41
GPM6B-209ENST00000493085 HELLSQ9NRZ9 838 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
GPM6B-209ENST00000493085 MGAMO43451 1857 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 ROBO3Q96MS0 1386 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 HOXA7P31268 230 aaPredicted RBP12.48□□□□□ -0.41
GPM6B-209ENST00000493085 ACER1Q8TDN7 264 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 ARHGAP39Q9C0H5 1083 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 MKNK2Q9HBH9 465 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 PTPN22Q9Y2R2 807 aa12.48□□□□□ -0.41
GPM6B-209ENST00000493085 A0A0D9SFI3 127 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 FMNL1O95466 1100 aaPredicted RBP12.47□□□□□ -0.41
GPM6B-209ENST00000493085 GNRH1P01148 92 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 PDE4AP27815 886 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 PSMC4P43686 418 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 GCLCP48506 637 aaPredicted RBP12.47□□□□□ -0.41
GPM6B-209ENST00000493085 ICA1Q05084 483 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 NMIQ13287 307 aaPredicted RBP12.47□□□□□ -0.41
GPM6B-209ENST00000493085 MCMDC2Q4G0Z9 681 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
GPM6B-209ENST00000493085 SLC3A2P08195 630 aaKnown RBP12.46□□□□□ -0.41
GPM6B-209ENST00000493085 SDSP20132 328 aa12.46□□□□□ -0.41
GPM6B-209ENST00000493085 HOXD10P28358 340 aa12.46□□□□□ -0.41
GPM6B-209ENST00000493085 CTGFP29279 349 aa12.46□□□□□ -0.41
GPM6B-209ENST00000493085 FCGRTP55899 365 aa12.46□□□□□ -0.41
GPM6B-209ENST00000493085 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
GPM6B-209ENST00000493085 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.41
GPM6B-209ENST00000493085 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
GPM6B-209ENST00000493085 DOCK3Q8IZD9 2030 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 A0A1W2PRG0 241 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 HIP1O00291 1037 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 VCAM1P19320 739 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 RASA1P20936 1047 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 PRMT2P55345 433 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 HERVK_113P62684 666 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 ATP2B2Q01814 1243 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 PDE4BQ07343 736 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 PPARAQ07869 468 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 VPS53Q5VIR6 699 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
GPM6B-209ENST00000493085 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
GPM6B-209ENST00000493085 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 KANSL2Q9H9L4 492 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 DIAPH3Q9NSV4 1193 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 PTCH2Q9Y6C5 1203 aa12.45□□□□□ -0.42
GPM6B-209ENST00000493085 GREB1LQ9C091 1923 aaPredicted RBP12.45□□□□□ -0.42
GPM6B-209ENST00000493085 CCDC171Q6TFL3 1326 aa12.44□□□□□ -0.42
GPM6B-209ENST00000493085 TNPO2O14787 897 aaKnown RBP12.44□□□□□ -0.42
GPM6B-209ENST00000493085 FOXP2O15409 715 aa12.44□□□□□ -0.42
GPM6B-209ENST00000493085 PRDM1O75626 825 aa12.44□□□□□ -0.42
GPM6B-209ENST00000493085 EEF2P13639 858 aaKnown RBP12.44□□□□□ -0.42
GPM6B-209ENST00000493085 MFAP1P55081 439 aaKnown RBP12.44□□□□□ -0.42
GPM6B-209ENST00000493085 TTC22Q5TAA0 569 aa12.44□□□□□ -0.42
GPM6B-209ENST00000493085 CATSPERGQ6ZRH7 1159 aa12.44□□□□□ -0.42
GPM6B-209ENST00000493085 ZNF589Q86UQ0 364 aaPredicted RBP12.44□□□□□ -0.42
GPM6B-209ENST00000493085 GTF3C2Q8WUA4 911 aaPredicted RBP12.44□□□□□ -0.42
GPM6B-209ENST00000493085 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
GPM6B-209ENST00000493085 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
GPM6B-209ENST00000493085 TMX2Q9Y320 296 aa12.44□□□□□ -0.42
GPM6B-209ENST00000493085 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 MYH4Q9Y623 1939 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 HSPD1P10809 573 aaKnown RBP12.43□□□□□ -0.42
GPM6B-209ENST00000493085 GSPT1P15170 499 aaKnown RBP12.43□□□□□ -0.42
GPM6B-209ENST00000493085 ALX1Q15699 326 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 CWC27Q6UX04 472 aaKnown RBP12.43□□□□□ -0.42
GPM6B-209ENST00000493085 SIAH1Q8IUQ4 282 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 RAET1EQ8TD07 263 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 LPAR1Q92633 364 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.43□□□□□ -0.42
GPM6B-209ENST00000493085 VCPKMTQ9H867 229 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 MORF4L1Q9UBU8 362 aa12.43□□□□□ -0.42
GPM6B-209ENST00000493085 FGAP02671 866 aa12.42□□□□□ -0.42
GPM6B-209ENST00000493085 TSPY3P0CV98 308 aa12.42□□□□□ -0.42
GPM6B-209ENST00000493085 TSPY8P0CW00 308 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms