RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 CERKLQ49MI3 558 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 APOA5Q6Q788 366 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 ENAHQ8N8S7 591 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 CTCFLQ8NI51 663 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 FOXD4L4Q8WXT5 416 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 AGXT2Q9BYV1 514 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 EHD4Q9H223 541 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 SENP2Q9HC62 589 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 CABP5Q9NP86 173 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 GGA3Q9NZ52 723 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 BRPF3Q9ULD4 1205 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 CIZ1Q9ULV3 898 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 ATRNL1Q5VV63 1379 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 PTPDC1A2A3K4 754 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 H3BQV1 296 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 EGFRP00533 1210 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 FGRP09769 529 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 CALM1P0DP23 149 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 CALM2P0DP24 149 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 CALM3P0DP25 149 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 EPS15P42566 896 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 HMGN5P82970 282 aaKnown RBP9.38□□□□□ -0.91
FDPS-218ENST00000492887 AKAP17AQ02040 695 aaKnown RBP9.38□□□□□ -0.91
FDPS-218ENST00000492887 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 ANGEL2Q5VTE6 544 aaKnown RBP9.38□□□□□ -0.91
FDPS-218ENST00000492887 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 SGMS1Q86VZ5 419 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 FOXP4Q8IVH2 680 aaPredicted RBP9.38□□□□□ -0.91
FDPS-218ENST00000492887 NEDD1Q8NHV4 660 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 IGDCC4Q8TDY8 1250 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 TMEM39BQ9GZU3 492 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 ADARB2Q9NS39 739 aaKnown RBP9.38□□□□□ -0.91
FDPS-218ENST00000492887 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
FDPS-218ENST00000492887 PTPRFP10586 1907 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 PHIPQ8WWQ0 1821 aa9.38□□□□□ -0.91
FDPS-218ENST00000492887 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 ASTN2O75129 1339 aaPredicted RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 JAK2O60674 1132 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 PPFIA3O75145 1194 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 DDAH1O94760 285 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 SHMT1P34896 483 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 GABPAQ06546 454 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 RASA3Q14644 834 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 RAB3GAP1Q15042 981 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 SEC23AQ15436 765 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 ABCB5Q2M3G0 1257 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 FKBP1CQ5VVH2 108 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 SH3BP5LQ7L8J4 393 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 LRRC47Q8N1G4 583 aaKnown RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 CCDC17Q96LX7 622 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 LLPHQ9BRT6 129 aaKnown RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 SLC26A6Q9BXS9 759 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 HERC5Q9UII4 1024 aaKnown RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 RBBP6Q7Z6E9 1792 aaKnown RBP9.37□□□□□ -0.91
FDPS-218ENST00000492887 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
FDPS-218ENST00000492887 WDR33Q9C0J8 1336 aaKnown RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 CD44P16070 742 aaKnown RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 PDCP20941 246 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 KIF5BP33176 963 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 ICA1Q05084 483 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 CCDC96Q2M329 555 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 LARP1BQ659C4 914 aaKnown RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 DCAF15Q66K64 600 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 MIGA2Q7L4E1 593 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 DGKHQ86XP1 1220 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 CLEC10AQ8IUN9 316 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 NSUN7Q8NE18 718 aaKnown RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 DCPSQ96C86 337 aaKnown RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 HOOK2Q96ED9 719 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 ZBED3Q96IU2 234 aaPredicted RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 DNAJC18Q9H819 358 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 TCP11L1Q9NUJ3 509 aa9.36□□□□□ -0.91
FDPS-218ENST00000492887 ORC3Q9UBD5 711 aaPredicted RBP9.36□□□□□ -0.91
FDPS-218ENST00000492887 PARP14Q460N5 1801 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 IQCA1LA6NCM1 817 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 GLTPD2A6NH11 291 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 STX6O43752 255 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 TTLL1O95922 423 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 TOP1P11387 765 aaKnown RBP9.35□□□□□ -0.91
FDPS-218ENST00000492887 CDC27P30260 824 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 EPHX2P34913 555 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 TRIM29Q14134 588 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 SEPT2Q15019 361 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 TMEM179Q6ZVK1 233 aa9.35□□□□□ -0.91
FDPS-218ENST00000492887 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms