RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 USP17L17D6RBQ6 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L19D6RCP7 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L20D6RJB6 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 CYBAP13498 195 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L24Q0WX57 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 SNX17Q15036 470 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 ZYXQ15942 572 aaKnown RBP14.87□□□□□ -0.03
GPNMB-214ENST00000492858 MAPKAPK5Q8IW41 473 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 SPATA5Q8NB90 893 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 SSH1Q8WYL5 1049 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 COPRSQ9NQ92 184 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 XIRP2A4UGR9 3374 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 DNAJB2P25686 324 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 ADCYAP1R1P41586 468 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 EPHB4P54760 987 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 METTL16Q86W50 562 aaKnown RBP14.86□□□□□ -0.03
GPNMB-214ENST00000492858 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
GPNMB-214ENST00000492858 TGFBRAP1Q8WUH2 860 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 FERMT2Q96AC1 680 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 FAM122AQ96E09 287 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 FEZ1Q99689 392 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 AATFQ9NY61 560 aaKnown RBP eCLIP14.86□□□□□ -0.03
GPNMB-214ENST00000492858 AKAP2Q9Y2D5 859 aa14.86□□□□□ -0.03
GPNMB-214ENST00000492858 ITGB8P26012 769 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 TFCP2Q12800 502 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 GORABQ5T7V8 394 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 C12orf42Q96LP6 360 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 NEUROD6Q96NK8 337 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 BTBD7Q9P203 1132 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 LRP2BPQ9P2M1 347 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 PALD1Q9ULE6 856 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 FLT1P17948 1338 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 SIPA1L1O43166 1804 aa14.85□□□□□ -0.03
GPNMB-214ENST00000492858 RLFQ13129 1914 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 SEPT4O43236 478 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 BAG3O95817 575 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 GH2P01242 217 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 IGHA2P01877 340 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 TLE2Q04725 743 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 CATSPERGQ6ZRH7 1159 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 DPP9Q86TI2 863 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 PPM1EQ8WY54 764 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
GPNMB-214ENST00000492858 TACC3Q9Y6A5 838 aa14.84□□□□□ -0.03
GPNMB-214ENST00000492858 CHD9Q3L8U1 2897 aa14.83□□□□□ -0.03
GPNMB-214ENST00000492858 PLCG2P16885 1265 aa14.83□□□□□ -0.04
GPNMB-214ENST00000492858 VCAM1P19320 739 aa14.83□□□□□ -0.04
GPNMB-214ENST00000492858 LRRC41Q15345 812 aa14.83□□□□□ -0.04
GPNMB-214ENST00000492858 C1orf53Q5VUE5 145 aa14.83□□□□□ -0.04
GPNMB-214ENST00000492858 OLFML2BQ68BL8 750 aa14.83□□□□□ -0.04
GPNMB-214ENST00000492858 NAA16Q6N069 864 aaPredicted RBP14.83□□□□□ -0.04
GPNMB-214ENST00000492858 ATXN2LQ8WWM7 1075 aaKnown RBP14.83□□□□□ -0.04
GPNMB-214ENST00000492858 ZNF576Q9H609 170 aa14.83□□□□□ -0.04
GPNMB-214ENST00000492858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.83□□□□□ -0.04
GPNMB-214ENST00000492858 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.82□□□□□ -0.04
GPNMB-214ENST00000492858 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.82□□□□□ -0.04
GPNMB-214ENST00000492858 HLA-DOAP06340 250 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 CLTBP09497 229 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 RAG1P15918 1043 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 ADORA2AP29274 412 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
GPNMB-214ENST00000492858 MCAMP43121 646 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 USP14P54578 494 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 MAP3K12Q12852 859 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 LBX2Q6XYB7 198 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 ADAMTS19Q8TE59 1207 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 TIFAQ96CG3 184 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 ASB2Q96Q27 587 aa14.82□□□□□ -0.04
GPNMB-214ENST00000492858 BDP1A6H8Y1 2624 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
GPNMB-214ENST00000492858 PPP4CP60510 307 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 FPGSQ05932 587 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 RAB3GAP1Q15042 981 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 FAM47AQ5JRC9 791 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 PRAMEF19Q5SWL8 479 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 ATF7IPQ6VMQ6 1270 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 UHRF1Q96T88 793 aaPredicted RBP14.81□□□□□ -0.04
GPNMB-214ENST00000492858 GAS2L1Q99501 681 aaPredicted RBP14.81□□□□□ -0.04
GPNMB-214ENST00000492858 THEGQ9P2T0 379 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 HDAC5Q9UQL6 1122 aa14.81□□□□□ -0.04
GPNMB-214ENST00000492858 KIAA0355O15063 1070 aa14.8□□□□□ -0.04
GPNMB-214ENST00000492858 PQBP1O60828 265 aaKnown RBP14.8□□□□□ -0.04
GPNMB-214ENST00000492858 COBLO75128 1261 aa14.8□□□□□ -0.04
GPNMB-214ENST00000492858 ADGRA1Q86SQ6 560 aa14.8□□□□□ -0.04
GPNMB-214ENST00000492858 ACER1Q8TDN7 264 aa14.8□□□□□ -0.04
GPNMB-214ENST00000492858 MOV10L1Q9BXT6 1211 aaKnown RBP14.8□□□□□ -0.04
GPNMB-214ENST00000492858 KIAA1683Q9H0B3 1180 aa14.8□□□□□ -0.04
GPNMB-214ENST00000492858 RPAP3Q9H6T3 665 aaPredicted RBP14.8□□□□□ -0.04
GPNMB-214ENST00000492858 CHD7Q9P2D1 2997 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 SRGAP3O43295 1099 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 STRNO43815 780 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 MRPS5P82675 430 aaKnown RBP14.79□□□□□ -0.04
GPNMB-214ENST00000492858 MEIS3Q99687 375 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 PRDM12Q9H4Q4 367 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 SMC4Q9NTJ3 1288 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 TMEM39AQ9NV64 488 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 PHF24Q9UPV7 400 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 REV3LO60673 3130 aa14.79□□□□□ -0.04
GPNMB-214ENST00000492858 ZNF521Q96K83 1311 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms