RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 PCDHGC3Q9UN70 934 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 DAAM1Q9Y4D1 1078 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 AK5Q9Y6K8 562 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CCDC171Q6TFL3 1326 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 MED23Q9ULK4 1368 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 PNMA6FA0A0J9YX94 578 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ESPNB1AK53 854 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 KLF4O43474 513 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 RASGRP1O95267 797 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ZSCAN22P10073 491 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 RBP3P10745 1247 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ATP5JP18859 108 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 MPSTP25325 297 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 PRSS12P56730 875 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 GEMIN4P57678 1058 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 IFRD2Q12894 506 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 AIMP1Q12904 312 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 NMIQ13287 307 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 NBPF20Q3BBV1 942 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 Q3C1V9 767 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 TKFCQ3LXA3 575 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 TBC1D10BQ4KMP7 808 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 EPHA10Q5JZY3 1008 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 CREB3L3Q68CJ9 461 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ANKRD13DQ6ZTN6 518 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ZNF354CQ86Y25 554 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 SPICE1Q8N0Z3 855 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 TTC5Q8N0Z6 440 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 CPXCR1Q8N123 301 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ANKRD42Q8N9B4 389 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 RDH13Q8NBN7 331 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 SLAIN1Q8ND83 568 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 PLBD2Q8NHP8 589 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 TPCN2Q8NHX9 752 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 CERKQ8TCT0 537 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 SNRNP27Q8WVK2 155 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ANP32BQ92688 251 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 SYAP1Q96A49 352 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 SEC16BQ96JE7 1060 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 JAKMIP1Q96N16 626 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 SRRTQ9BXP5 876 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 NIF3L1Q9GZT8 377 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 CCDC8Q9H0W5 538 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 RBSNQ9H1K0 784 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 PDRG1Q9NUG6 133 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 CWC25Q9NXE8 425 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 CLIC5Q9NZA1 410 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 HMG20BQ9P0W2 317 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 ZNF69Q9UC07 566 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 EVLQ9UI08 416 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 FBXO2Q9UK22 296 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 GTF2A1LQ9UNN4 478 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 NSFL1CQ9UNZ2 370 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 DIS3Q9Y2L1 958 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 RBM8AQ9Y5S9 174 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 USP16Q9Y5T5 823 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 CYP46A1Q9Y6A2 500 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 V9GY48 417 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 GLI3P10071 1580 aa4.39□□□□□ -1.71
ATPAF1-206ENST00000492233 PKD1L3Q7Z443 1732 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 SCN11AQ9UI33 1791 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 ERVV-2B6SEH9 535 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 C6orf229H3BNL8 230 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 H7C1W4 665 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 SLC27A2O14975 620 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 STX6O43752 255 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TAF5LO75529 589 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TCEA3O75764 348 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 DKK1O94907 266 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 LARGE1O95461 756 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 F13A1P00488 732 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 MYL6BP14649 208 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 ZKSCAN1P17029 563 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 NPR3P17342 541 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 CASTP20810 708 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 SYT1P21579 422 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 PSMA5P28066 241 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 RAB27AP51159 221 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 CABP4P57796 275 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 USP46P62068 366 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 NFKB2Q00653 900 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 MCL1Q07820 350 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 ST3GAL1Q11201 340 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TOMM20Q15388 145 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 C21orf62-AS1Q17RA5 79 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 MAP7D1Q3KQU3 841 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 ADCK5Q3MIX3 580 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TNNI3KQ59H18 835 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 CT47A1Q5JQC4 288 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 RNF20Q5VTR2 975 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 USPL1Q5W0Q7 1092 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 CCDC102BQ68D86 513 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 MSL1Q68DK7 614 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 PRPF40BQ6NWY9 871 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 DDX17Q92841 729 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TRIM44Q96DX7 344 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 CHAMP1Q96JM3 812 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms