RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 GFRA2O00451 464 aa7.83□□□□□ -1.16
PHC3-213ENST00000491258 ETV3P41162 512 aa7.83□□□□□ -1.16
PHC3-213ENST00000491258 PIWIL2Q8TC59 973 aaKnown RBP7.83□□□□□ -1.16
PHC3-213ENST00000491258 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
PHC3-213ENST00000491258 TCAF2A6NFQ2 919 aa7.82□□□□□ -1.16
PHC3-213ENST00000491258 LILRA6Q6PI73 481 aa7.82□□□□□ -1.16
PHC3-213ENST00000491258 ATG14Q6ZNE5 492 aa7.82□□□□□ -1.16
PHC3-213ENST00000491258 MRPL41Q8IXM3 137 aaKnown RBP7.82□□□□□ -1.16
PHC3-213ENST00000491258 TACC3Q9Y6A5 838 aa7.82□□□□□ -1.16
PHC3-213ENST00000491258 TPP2P29144 1249 aaPredicted RBP7.81□□□□□ -1.16
PHC3-213ENST00000491258 GNA15P30679 374 aa7.81□□□□□ -1.16
PHC3-213ENST00000491258 KCNA10Q16322 511 aa7.81□□□□□ -1.16
PHC3-213ENST00000491258 SLC6A19Q695T7 634 aa7.81□□□□□ -1.16
PHC3-213ENST00000491258 MIR1-1HGQ9H1L0 117 aa7.81□□□□□ -1.16
PHC3-213ENST00000491258 ADAMTS10Q9H324 1103 aa7.81□□□□□ -1.16
PHC3-213ENST00000491258 HPXP02790 462 aa7.8□□□□□ -1.16
PHC3-213ENST00000491258 TRHRP34981 398 aaPredicted RBP7.8□□□□□ -1.16
PHC3-213ENST00000491258 LIG3P49916 1009 aa7.8□□□□□ -1.16
PHC3-213ENST00000491258 PDE4BQ07343 736 aa7.8□□□□□ -1.16
PHC3-213ENST00000491258 CIAPIN1Q6FI81 312 aa7.8□□□□□ -1.16
PHC3-213ENST00000491258 AGMOQ6ZNB7 445 aa7.8□□□□□ -1.16
PHC3-213ENST00000491258 Q96M66 194 aa7.8□□□□□ -1.16
PHC3-213ENST00000491258 TRIT1Q9H3H1 467 aaKnown RBP7.8□□□□□ -1.16
PHC3-213ENST00000491258 CD320Q9NPF0 282 aa7.8□□□□□ -1.16
PHC3-213ENST00000491258 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
PHC3-213ENST00000491258 DNAJB8Q8NHS0 232 aa7.79□□□□□ -1.16
PHC3-213ENST00000491258 KCNN1Q92952 543 aa7.79□□□□□ -1.16
PHC3-213ENST00000491258 SLC26A8Q96RN1 970 aa7.79□□□□□ -1.16
PHC3-213ENST00000491258 DUSP15Q9H1R2 295 aaPredicted RBP7.79□□□□□ -1.16
PHC3-213ENST00000491258 DUSP13Q9UII6 198 aa7.79□□□□□ -1.16
PHC3-213ENST00000491258 MED14OSP0DP75 135 aa7.78□□□□□ -1.16
PHC3-213ENST00000491258 JARID2Q92833 1246 aaPredicted RBP7.78□□□□□ -1.16
PHC3-213ENST00000491258 ACSF2Q96CM8 615 aaPredicted RBP7.78□□□□□ -1.16
PHC3-213ENST00000491258 RNF32Q9H0A6 362 aa7.78□□□□□ -1.16
PHC3-213ENST00000491258 CEP131Q9UPN4 1083 aa7.78□□□□□ -1.16
PHC3-213ENST00000491258 SMG5Q9UPR3 1016 aaKnown RBP7.78□□□□□ -1.16
PHC3-213ENST00000491258 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
PHC3-213ENST00000491258 EGR3Q06889 387 aa7.77□□□□□ -1.17
PHC3-213ENST00000491258 TSNAXIP1Q2TAA8 658 aa7.77□□□□□ -1.17
PHC3-213ENST00000491258 MCATQ8IVS2 390 aaKnown RBP7.77□□□□□ -1.17
PHC3-213ENST00000491258 GPATCH2Q9NW75 528 aa7.77□□□□□ -1.17
PHC3-213ENST00000491258 AK5Q9Y6K8 562 aa7.77□□□□□ -1.17
PHC3-213ENST00000491258 NUAK1O60285 661 aa7.76□□□□□ -1.17
PHC3-213ENST00000491258 PRPF40AO75400 957 aaKnown RBP7.76□□□□□ -1.17
PHC3-213ENST00000491258 GLDCP23378 1020 aa7.76□□□□□ -1.17
PHC3-213ENST00000491258 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
PHC3-213ENST00000491258 GAB4Q2WGN9 574 aa7.76□□□□□ -1.17
PHC3-213ENST00000491258 TTLL10Q6ZVT0 673 aa7.76□□□□□ -1.17
PHC3-213ENST00000491258 C19orf44Q9H6X5 657 aa7.76□□□□□ -1.17
PHC3-213ENST00000491258 RNF19AQ9NV58 838 aa7.76□□□□□ -1.17
PHC3-213ENST00000491258 ADAM30Q9UKF2 790 aa7.76□□□□□ -1.17
PHC3-213ENST00000491258 INHBBP09529 407 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 LTKP29376 864 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 KCNA1Q09470 495 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 FAM13CQ8NE31 585 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 PDZD8Q8NEN9 1154 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 DUSP9Q99956 384 aaKnown RBP7.75□□□□□ -1.17
PHC3-213ENST00000491258 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 KCNH3Q9ULD8 1083 aa7.75□□□□□ -1.17
PHC3-213ENST00000491258 LINC00310P59036 64 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 MEI1Q5TIA1 1274 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 DIEXFQ68CQ4 756 aaKnown RBP7.74□□□□□ -1.17
PHC3-213ENST00000491258 TSPYL5Q86VY4 417 aaPredicted RBP7.74□□□□□ -1.17
PHC3-213ENST00000491258 OXR1Q8N573 874 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 DTWD2Q8NBA8 298 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 PPP1R13LQ8WUF5 828 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 CYB5D2Q8WUJ1 264 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 GPR62Q9BZJ7 368 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 TLR6Q9Y2C9 796 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 CORINQ9Y5Q5 1042 aa7.74□□□□□ -1.17
PHC3-213ENST00000491258 UPK3BL1B0FP48 263 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 B8ZZF3 427 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 UPK3BL2E5RIL1 263 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 ZGLP1P0C6A0 271 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 PLCG1P19174 1290 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 LILRA2Q8N149 483 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 SYTL4Q96C24 671 aaPredicted RBP7.73□□□□□ -1.17
PHC3-213ENST00000491258 IRF2BPLQ9H1B7 796 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 SLC6A17Q9H1V8 727 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 SP110Q9HB58 689 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 PCDHA11Q9Y5I1 949 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 NCANO14594 1321 aa7.73□□□□□ -1.17
PHC3-213ENST00000491258 PRRG2O14669 202 aa7.72□□□□□ -1.17
PHC3-213ENST00000491258 SRFP11831 508 aa7.72□□□□□ -1.17
PHC3-213ENST00000491258 ZNF605Q86T29 641 aa7.72□□□□□ -1.17
PHC3-213ENST00000491258 RAPGEFL1Q9UHV5 662 aa7.72□□□□□ -1.17
PHC3-213ENST00000491258 FITM1A5D6W6 292 aa7.71□□□□□ -1.18
PHC3-213ENST00000491258 LRRN2O75325 713 aa7.71□□□□□ -1.18
PHC3-213ENST00000491258 RLBP1P12271 317 aa7.71□□□□□ -1.18
PHC3-213ENST00000491258 TNNI2P48788 182 aa7.71□□□□□ -1.18
PHC3-213ENST00000491258 YARSP54577 528 aaKnown RBP7.71□□□□□ -1.18
PHC3-213ENST00000491258 TIGD5Q53EQ6 642 aa7.71□□□□□ -1.18
PHC3-213ENST00000491258 IRF2BP1Q8IU81 584 aa7.71□□□□□ -1.18
PHC3-213ENST00000491258 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.18
PHC3-213ENST00000491258 MCOLN1Q9GZU1 580 aa7.71□□□□□ -1.18
PHC3-213ENST00000491258 BPNT1O95861 308 aa7.7□□□□□ -1.18
PHC3-213ENST00000491258 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
PHC3-213ENST00000491258 RNF141Q8WVD5 230 aa7.7□□□□□ -1.18
PHC3-213ENST00000491258 CWC22Q9HCG8 908 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms