RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 NFE2L2Q16236 605 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 PPP2R5EQ16537 467 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 NBPF6Q5VWK0 638 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 LRFN4Q6PJG9 635 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 REXO1Q8N1G1 1221 aaKnown RBP7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 AFAP1Q8N556 730 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 GALNT11Q8NCW6 608 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 ELMO3Q96BJ8 720 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 WDR89Q96FK6 387 aaPredicted RBP7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 PLPPR2Q96GM1 343 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 NBPF4Q96M43 638 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 RRAGCQ9HB90 399 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 ST7Q9NRC1 585 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 ZNRF3Q9ULT6 936 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 CORINQ9Y5Q5 1042 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 CSADQ9Y600 493 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 RREB1Q92766 1687 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 NKTRP30414 1462 aaKnown RBP7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 DCDC2CA8MYV0 355 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 KLF4O43474 513 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 GIPRP48546 466 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 RAB33AQ14088 237 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 SUZ12Q15022 739 aaKnown RBP7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 SETDB1Q15047 1291 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 TNNI3KQ59H18 835 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 TRAPPC3LQ5T215 181 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 SCARA3Q6AZY7 606 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 RUFY4Q6ZNE9 571 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 HDXQ7Z353 690 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 KLHL23Q8NBE8 558 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 NRSN2Q9GZP1 204 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 ANTXR1Q9H6X2 564 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 SPON1Q9HCB6 807 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 SIRPGQ9P1W8 387 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 PLXNC1O60486 1568 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 MAST1Q9Y2H9 1570 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 NUP188Q5SRE5 1749 aa7.07□□□□□ -1.28
SSX2IP-208ENST00000490476 TLDC2A0PJX2 215 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 PRAMEF27A3QJZ7 478 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 RNF225M0QZC1 329 aaPredicted RBP7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 ZNF862O60290 1169 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 IMPDH2P12268 514 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 SELPP16109 830 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 SERINC3Q13530 473 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 LARP1BQ659C4 914 aaKnown RBP7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 LYPD4Q6UWN0 246 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 LSRQ86X29 649 aaPredicted RBP7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 EHMT1Q9H9B1 1298 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 PICK1Q9NRD5 415 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 RAD18Q9NS91 495 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 KRT82Q9NSB4 513 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 ACTR10Q9NZ32 417 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 GLI3P10071 1580 aa7.06□□□□□ -1.28
SSX2IP-208ENST00000490476 CAMSAP2Q08AD1 1489 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 UBR1Q8IWV7 1749 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 SETD5Q9C0A6 1442 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 ADAM11O75078 769 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 HTR3BO95264 441 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 CELA2BP08218 269 aaPredicted RBP7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 CD68P34810 354 aaPredicted RBP7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 HNRNPUQ00839 825 aaKnown RBP eCLIP7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 ZNF385CQ66K41 422 aaPredicted RBP7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 C12orf40Q86WS4 652 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 CELF2-AS1Q8N7Q2 184 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 TNKS2Q9H2K2 1166 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 KCNK4Q9NYG8 393 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 ADAMTS8Q9UP79 889 aa7.05□□□□□ -1.28
SSX2IP-208ENST00000490476 SAMD9Q5K651 1589 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 LOC100289279A0A1B0GTE1 492 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 GFRA2O00451 464 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 DEAF1O75398 565 aaPredicted RBP7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 DLGAP3O95886 979 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 NID1P14543 1247 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 PLCG1P19174 1290 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 GSK3AP49840 483 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 ZNF746Q6NUN9 644 aaPredicted RBP7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 DNAJC5GQ8N7S2 189 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 OR6P1Q8NGX9 317 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 WHAMMQ8TF30 809 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 CACNA2D2Q9NY47 1150 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 SNCAIPQ9Y6H5 919 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 DLC1Q96QB1 1528 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 PZPP20742 1482 aa7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 NUP153P49790 1475 aaKnown RBP7.04□□□□□ -1.28
SSX2IP-208ENST00000490476 ADGRB2O60241 1585 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 MROH1Q8NDA8 1641 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 FAM86C2PA6NEL3 165 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 ATE1O95260 518 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 SLFN14P0C7P3 912 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 CANXP27824 592 aaKnown RBP7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 AKAP4Q5JQC9 854 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 SDE2Q6IQ49 451 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 JAZF1Q86VZ6 243 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 MAP4K3Q8IVH8 894 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 NEDD1Q8NHV4 660 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms