RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 CCDC129Q6ZRS4 1044 aa22.87■■□□□ 1.25
EPHB4-207ENST00000489808 KIAA1683Q9H0B3 1180 aa22.87■■□□□ 1.25
EPHB4-207ENST00000489808 ASCC2Q9H1I8 757 aaPredicted RBP22.87■■□□□ 1.25
EPHB4-207ENST00000489808 DDX60LQ5H9U9 1706 aaKnown RBP22.87■■□□□ 1.25
EPHB4-207ENST00000489808 USP14P54578 494 aa22.86■■□□□ 1.25
EPHB4-207ENST00000489808 MCMDC2Q4G0Z9 681 aa22.86■■□□□ 1.25
EPHB4-207ENST00000489808 C12orf42Q96LP6 360 aa22.86■■□□□ 1.25
EPHB4-207ENST00000489808 FAM227BQ96M60 508 aa22.86■■□□□ 1.25
EPHB4-207ENST00000489808 FEZ1Q99689 392 aa22.86■■□□□ 1.25
EPHB4-207ENST00000489808 MYH7P12883 1935 aa22.86■■□□□ 1.25
EPHB4-207ENST00000489808 GNRH1P01148 92 aa22.85■■□□□ 1.25
EPHB4-207ENST00000489808 CTGFP29279 349 aa22.85■■□□□ 1.25
EPHB4-207ENST00000489808 PSMC4P43686 418 aa22.85■■□□□ 1.25
EPHB4-207ENST00000489808 SIAH1Q8IUQ4 282 aa22.85■■□□□ 1.25
EPHB4-207ENST00000489808 P2RX7Q99572 595 aaKnown RBP22.85■■□□□ 1.25
EPHB4-207ENST00000489808 NAV1Q8NEY1 1877 aa22.84■■□□□ 1.25
EPHB4-207ENST00000489808 A0A1W2PRG0 241 aa22.84■■□□□ 1.25
EPHB4-207ENST00000489808 ECM2O94769 699 aaPredicted RBP22.84■■□□□ 1.25
EPHB4-207ENST00000489808 SDSP20132 328 aa22.84■■□□□ 1.25
EPHB4-207ENST00000489808 GCLCP48506 637 aaPredicted RBP22.84■■□□□ 1.25
EPHB4-207ENST00000489808 ZYXQ15942 572 aaKnown RBP22.84■■□□□ 1.25
EPHB4-207ENST00000489808 STK11IPQ8N1F8 1099 aa22.84■■□□□ 1.25
EPHB4-207ENST00000489808 NAPBQ9H115 298 aa22.84■■□□□ 1.25
EPHB4-207ENST00000489808 MKNK2Q9HBH9 465 aa22.84■■□□□ 1.25
EPHB4-207ENST00000489808 A0A0D9SFI3 127 aa22.83■■□□□ 1.25
EPHB4-207ENST00000489808 FOXP2O15409 715 aa22.83■■□□□ 1.25
EPHB4-207ENST00000489808 FMNL1O95466 1100 aaPredicted RBP22.83■■□□□ 1.25
EPHB4-207ENST00000489808 IRX3P78415 501 aaPredicted RBP22.83■■□□□ 1.25
EPHB4-207ENST00000489808 NMIQ13287 307 aaPredicted RBP22.83■■□□□ 1.25
EPHB4-207ENST00000489808 ANKRD13CQ8N6S4 541 aa22.83■■□□□ 1.25
EPHB4-207ENST00000489808 TRIM47Q96LD4 638 aa22.83■■□□□ 1.25
EPHB4-207ENST00000489808 VPS53Q5VIR6 699 aa22.82■■□□□ 1.24
EPHB4-207ENST00000489808 ATAD5Q96QE3 1844 aa22.82■■□□□ 1.24
EPHB4-207ENST00000489808 ROBO3Q96MS0 1386 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L15C9J2P7 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L13C9JLJ4 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L11C9JVI0 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L18D6R9N7 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L22D6RA61 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L17D6RBQ6 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L19D6RCP7 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L20D6RJB6 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 RASA1P20936 1047 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 HOXD10P28358 340 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 PRMT2P55345 433 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 FCGRTP55899 365 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 ICA1Q05084 483 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 USP17L24Q0WX57 530 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 FAM110CQ1W6H9 321 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.81■■□□□ 1.24
EPHB4-207ENST00000489808 KANSL2Q9H9L4 492 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 ZNF287Q9HBT7 754 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 TMX2Q9Y320 296 aa22.81■■□□□ 1.24
EPHB4-207ENST00000489808 PTPRFP10586 1907 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 VCAM1P19320 739 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 HERVK_113P62684 666 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 PPARAQ07869 468 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 ALX1Q15699 326 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 CATSPERGQ6ZRH7 1159 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 ZNF444Q8N0Y2 327 aaPredicted RBP22.8■■□□□ 1.24
EPHB4-207ENST00000489808 ARHGEF10LQ9HCE6 1279 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 SRRDQ9UH36 339 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 PTCH2Q9Y6C5 1203 aa22.8■■□□□ 1.24
EPHB4-207ENST00000489808 BAZ2AQ9UIF9 1905 aaKnown RBP22.8■■□□□ 1.24
EPHB4-207ENST00000489808 SLC3A2P08195 630 aaKnown RBP22.79■■□□□ 1.24
EPHB4-207ENST00000489808 CLEC10AQ8IUN9 316 aa22.79■■□□□ 1.24
EPHB4-207ENST00000489808 MORF4L1Q9UBU8 362 aa22.79■■□□□ 1.24
EPHB4-207ENST00000489808 PRDM1O75626 825 aa22.78■■□□□ 1.24
EPHB4-207ENST00000489808 EEF2P13639 858 aaKnown RBP22.78■■□□□ 1.24
EPHB4-207ENST00000489808 PDE4BQ07343 736 aa22.78■■□□□ 1.24
EPHB4-207ENST00000489808 TTC22Q5TAA0 569 aa22.78■■□□□ 1.24
EPHB4-207ENST00000489808 ZNF589Q86UQ0 364 aaPredicted RBP22.78■■□□□ 1.24
EPHB4-207ENST00000489808 SH2D4AQ9H788 454 aa22.78■■□□□ 1.24
EPHB4-207ENST00000489808 RBPJLQ9UBG7 517 aa22.78■■□□□ 1.24
EPHB4-207ENST00000489808 HIP1O00291 1037 aa22.77■■□□□ 1.24
EPHB4-207ENST00000489808 FGAP02671 866 aa22.77■■□□□ 1.24
EPHB4-207ENST00000489808 HSPD1P10809 573 aaKnown RBP22.77■■□□□ 1.24
EPHB4-207ENST00000489808 KIAA1755Q5JYT7 1200 aa22.77■■□□□ 1.24
EPHB4-207ENST00000489808 POTEEQ6S8J3 1075 aa22.77■■□□□ 1.24
EPHB4-207ENST00000489808 GTF3C2Q8WUA4 911 aaPredicted RBP22.77■■□□□ 1.24
EPHB4-207ENST00000489808 RPAP3Q9H6T3 665 aaPredicted RBP22.77■■□□□ 1.24
EPHB4-207ENST00000489808 TXNRD2Q9NNW7 524 aa22.77■■□□□ 1.24
EPHB4-207ENST00000489808 DIAPH3Q9NSV4 1193 aa22.77■■□□□ 1.24
EPHB4-207ENST00000489808 LOC285556D6RIA3 1793 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 GSPT1P15170 499 aaKnown RBP22.76■■□□□ 1.23
EPHB4-207ENST00000489808 ATP2B2Q01814 1243 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 CWC27Q6UX04 472 aaKnown RBP22.76■■□□□ 1.23
EPHB4-207ENST00000489808 GPRC5AQ8NFJ5 357 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 LPAR1Q92633 364 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 ARMC5Q96C12 935 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 VCPKMTQ9H867 229 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 ANAPC4Q9UJX5 808 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 CCDC171Q6TFL3 1326 aa22.76■■□□□ 1.23
EPHB4-207ENST00000489808 PEX10O60683 326 aa22.75■■□□□ 1.23
EPHB4-207ENST00000489808 MFAP1P55081 439 aaKnown RBP22.75■■□□□ 1.23
EPHB4-207ENST00000489808 Q3C1V9 767 aa22.75■■□□□ 1.23
EPHB4-207ENST00000489808 NYAP2Q9P242 653 aa22.75■■□□□ 1.23
EPHB4-207ENST00000489808 MYPNQ86TC9 1320 aa22.75■■□□□ 1.23
EPHB4-207ENST00000489808 IGKV6D-41A0A0C4DH26 115 aa22.74■■□□□ 1.23
EPHB4-207ENST00000489808 TNPO2O14787 897 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms