RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 GLTPD2A6NH11 291 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 MPHOSPH10O00566 681 aaKnown RBP24.39■■□□□ 1.5
SND1-214ENST00000489417 CPLX1O14810 134 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 TBC1D12O60347 775 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 NOVP48745 357 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 RTN1Q16799 776 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 NUP133Q8WUM0 1156 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 TEPSINQ96N21 525 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 STX8Q9UNK0 236 aa24.39■■□□□ 1.5
SND1-214ENST00000489417 PTPDC1A2A3K4 754 aa24.38■■□□□ 1.49
SND1-214ENST00000489417 CDC27P30260 824 aa24.38■■□□□ 1.49
SND1-214ENST00000489417 NUCB2P80303 420 aa24.38■■□□□ 1.49
SND1-214ENST00000489417 HMGN5P82970 282 aaKnown RBP24.38■■□□□ 1.49
SND1-214ENST00000489417 CPLX2Q6PUV4 134 aaKnown RBP24.38■■□□□ 1.49
SND1-214ENST00000489417 TMEM47Q9BQJ4 181 aa24.38■■□□□ 1.49
SND1-214ENST00000489417 DEFB129Q9H1M3 183 aa24.38■■□□□ 1.49
SND1-214ENST00000489417 FAM217BQ9NTX9 383 aaPredicted RBP24.38■■□□□ 1.49
SND1-214ENST00000489417 MTMR4Q9NYA4 1195 aa24.38■■□□□ 1.49
SND1-214ENST00000489417 GGA3Q9NZ52 723 aa24.38■■□□□ 1.49
SND1-214ENST00000489417 GREB1LQ9C091 1923 aaPredicted RBP24.38■■□□□ 1.49
SND1-214ENST00000489417 ADD1P35611 737 aaKnown RBP24.37■■□□□ 1.49
SND1-214ENST00000489417 TROAPQ12815 778 aa24.37■■□□□ 1.49
SND1-214ENST00000489417 PPP4R3BQ5MIZ7 849 aa24.37■■□□□ 1.49
SND1-214ENST00000489417 FANCBQ8NB91 859 aa24.37■■□□□ 1.49
SND1-214ENST00000489417 PNMA1Q8ND90 353 aa24.37■■□□□ 1.49
SND1-214ENST00000489417 PITPNM2Q9BZ72 1349 aa24.37■■□□□ 1.49
SND1-214ENST00000489417 CCDC196A0A1B0GTZ2 297 aa24.36■■□□□ 1.49
SND1-214ENST00000489417 CDKL5O76039 1030 aa24.36■■□□□ 1.49
SND1-214ENST00000489417 TOP1P11387 765 aaKnown RBP24.36■■□□□ 1.49
SND1-214ENST00000489417 MAP3K10Q02779 954 aa24.36■■□□□ 1.49
SND1-214ENST00000489417 PPP2R5BQ15173 497 aa24.36■■□□□ 1.49
SND1-214ENST00000489417 ABCB5Q2M3G0 1257 aa24.36■■□□□ 1.49
SND1-214ENST00000489417 DDX11Q96FC9 970 aa24.36■■□□□ 1.49
SND1-214ENST00000489417 TMEM179Q6ZVK1 233 aa24.35■■□□□ 1.49
SND1-214ENST00000489417 GDF11O95390 407 aa24.35■■□□□ 1.49
SND1-214ENST00000489417 RAB3GAP1Q15042 981 aa24.35■■□□□ 1.49
SND1-214ENST00000489417 MIGA2Q7L4E1 593 aa24.35■■□□□ 1.49
SND1-214ENST00000489417 RBM28Q9NW13 759 aaKnown RBP24.35■■□□□ 1.49
SND1-214ENST00000489417 PPP2R3BQ9Y5P8 575 aa24.35■■□□□ 1.49
SND1-214ENST00000489417 TTLL1O95922 423 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 PDCP20941 246 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 PKP1Q13835 747 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 RRP1BQ14684 758 aaKnown RBP24.34■■□□□ 1.49
SND1-214ENST00000489417 NTRK3Q16288 839 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 CLEC10AQ8IUN9 316 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 FAM184AQ8NB25 1140 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 CTCFLQ8NI51 663 aaPredicted RBP24.34■■□□□ 1.49
SND1-214ENST00000489417 MAP3K14Q99558 947 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 CABP5Q9NP86 173 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 KIF3AQ9Y496 699 aa24.34■■□□□ 1.49
SND1-214ENST00000489417 SYT1P21579 422 aa24.33■■□□□ 1.49
SND1-214ENST00000489417 EPHX2P34913 555 aa24.33■■□□□ 1.49
SND1-214ENST00000489417 SHROOM1Q2M3G4 852 aaPredicted RBP24.33■■□□□ 1.49
SND1-214ENST00000489417 USP50Q70EL3 339 aaPredicted RBP24.33■■□□□ 1.49
SND1-214ENST00000489417 KANSL2Q9H9L4 492 aa24.33■■□□□ 1.49
SND1-214ENST00000489417 CLIP2Q9UDT6 1046 aa24.33■■□□□ 1.49
SND1-214ENST00000489417 GH2P01242 217 aa24.32■■□□□ 1.48
SND1-214ENST00000489417 IFNAR1P17181 557 aa24.32■■□□□ 1.48
SND1-214ENST00000489417 GUCY1A2P33402 732 aa24.32■■□□□ 1.48
SND1-214ENST00000489417 GRM4Q14833 912 aa24.32■■□□□ 1.48
SND1-214ENST00000489417 SEPT2Q15019 361 aa24.32■■□□□ 1.48
SND1-214ENST00000489417 LARP1BQ659C4 914 aaKnown RBP24.32■■□□□ 1.48
SND1-214ENST00000489417 HOOK2Q96ED9 719 aa24.32■■□□□ 1.48
SND1-214ENST00000489417 ORC3Q9UBD5 711 aaPredicted RBP24.32■■□□□ 1.48
SND1-214ENST00000489417 IQCA1LA6NCM1 817 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 STX6O43752 255 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 PPFIA3O75145 1194 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 BRD1O95696 1058 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 FDPSP14324 419 aaKnown RBP24.31■■□□□ 1.48
SND1-214ENST00000489417 KIF5BP33176 963 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 JAG1P78504 1218 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 NBPF12Q5TAG4 269 aaPredicted RBP24.31■■□□□ 1.48
SND1-214ENST00000489417 NYAP2Q9P242 653 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 ZDHHC9Q9Y397 364 aa24.31■■□□□ 1.48
SND1-214ENST00000489417 WDR33Q9C0J8 1336 aaKnown RBP24.31■■□□□ 1.48
SND1-214ENST00000489417 WDR90Q96KV7 1748 aa24.3■■□□□ 1.48
SND1-214ENST00000489417 PDIA4P13667 645 aaKnown RBP24.3■■□□□ 1.48
SND1-214ENST00000489417 ICA1Q05084 483 aa24.3■■□□□ 1.48
SND1-214ENST00000489417 DCAF15Q66K64 600 aa24.3■■□□□ 1.48
SND1-214ENST00000489417 TMTC3Q6ZXV5 915 aa24.3■■□□□ 1.48
SND1-214ENST00000489417 DCPSQ96C86 337 aaKnown RBP24.3■■□□□ 1.48
SND1-214ENST00000489417 SCN4AP35499 1836 aa24.3■■□□□ 1.48
SND1-214ENST00000489417 STK36Q9NRP7 1315 aa24.3■■□□□ 1.48
SND1-214ENST00000489417 FMNL1O95466 1100 aaPredicted RBP24.29■■□□□ 1.48
SND1-214ENST00000489417 ATP2B2Q01814 1243 aa24.29■■□□□ 1.48
SND1-214ENST00000489417 SSRP1Q08945 709 aaKnown RBP24.29■■□□□ 1.48
SND1-214ENST00000489417 LRRC47Q8N1G4 583 aaKnown RBP24.29■■□□□ 1.48
SND1-214ENST00000489417 PHKBQ93100 1093 aa24.29■■□□□ 1.48
SND1-214ENST00000489417 DCAF8L1A6NGE4 600 aa24.28■■□□□ 1.48
SND1-214ENST00000489417 PLEKHA8P1O95397 391 aa24.28■■□□□ 1.48
SND1-214ENST00000489417 EEF2P13639 858 aaKnown RBP24.28■■□□□ 1.48
SND1-214ENST00000489417 CAP2P40123 477 aa24.28■■□□□ 1.48
SND1-214ENST00000489417 MKL1Q969V6 931 aa24.28■■□□□ 1.48
SND1-214ENST00000489417 SLC26A6Q9BXS9 759 aa24.28■■□□□ 1.48
SND1-214ENST00000489417 TAF1DQ9H5J8 278 aaPredicted RBP24.28■■□□□ 1.48
SND1-214ENST00000489417 ZBTB21Q9ULJ3 1066 aa24.28■■□□□ 1.48
SND1-214ENST00000489417 MTMR7Q9Y216 660 aa24.28■■□□□ 1.48
SND1-214ENST00000489417 PHF20L1A8MW92 1017 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 GNAQP50148 359 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 NBPF11Q86T75 865 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms