RNA–Protein interactions for RNA: ENST00000489093.1

BRD9-207, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-207ENST00000489093 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
BRD9-207ENST00000489093 AMOTL1Q8IY63 956 aa16.6■□□□□ 0.25
BRD9-207ENST00000489093 IFNL3Q8IZI9 196 aa16.6■□□□□ 0.25
BRD9-207ENST00000489093 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
BRD9-207ENST00000489093 TRIM47Q96LD4 638 aa16.6■□□□□ 0.25
BRD9-207ENST00000489093 FEZ1Q99689 392 aa16.6■□□□□ 0.25
BRD9-207ENST00000489093 ASCC2Q9H1I8 757 aaPredicted RBP16.6■□□□□ 0.25
BRD9-207ENST00000489093 TMOD4Q9NZQ9 345 aa16.6■□□□□ 0.25
BRD9-207ENST00000489093 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
BRD9-207ENST00000489093 GNAT2P19087 354 aa16.59■□□□□ 0.25
BRD9-207ENST00000489093 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
BRD9-207ENST00000489093 SBK1Q52WX2 424 aa16.59■□□□□ 0.25
BRD9-207ENST00000489093 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
BRD9-207ENST00000489093 PTPN22Q9Y2R2 807 aa16.59■□□□□ 0.25
BRD9-207ENST00000489093 C19orf81C9J6K1 198 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 PATL2C9JE40 543 aaKnown RBP16.58■□□□□ 0.24
BRD9-207ENST00000489093 PRDM1O75626 825 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 PSMC4P43686 418 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 USP17L2Q6R6M4 530 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 ZNF589Q86UQ0 364 aaPredicted RBP16.58■□□□□ 0.24
BRD9-207ENST00000489093 SIAH1Q8IUQ4 282 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 ANKRD13CQ8N6S4 541 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
BRD9-207ENST00000489093 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 ROBO3Q96MS0 1386 aa16.58■□□□□ 0.24
BRD9-207ENST00000489093 MYH8P13535 1937 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 RASA1P20936 1047 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 SOX10P56693 466 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 KIAA1755Q5JYT7 1200 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 TMEM179Q6ZVK1 233 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.57■□□□□ 0.24
BRD9-207ENST00000489093 KIAA1683Q9H0B3 1180 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 PNMA3Q9UL41 463 aa16.57■□□□□ 0.24
BRD9-207ENST00000489093 FMNL1O95466 1100 aaPredicted RBP16.56■□□□□ 0.24
BRD9-207ENST00000489093 VCAM1P19320 739 aa16.56■□□□□ 0.24
BRD9-207ENST00000489093 OSBPP22059 807 aa16.56■□□□□ 0.24
BRD9-207ENST00000489093 IRX3P78415 501 aaPredicted RBP16.56■□□□□ 0.24
BRD9-207ENST00000489093 ICA1Q05084 483 aa16.56■□□□□ 0.24
BRD9-207ENST00000489093 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
BRD9-207ENST00000489093 KIF22Q14807 665 aa16.56■□□□□ 0.24
BRD9-207ENST00000489093 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
BRD9-207ENST00000489093 NAPBQ9H115 298 aa16.56■□□□□ 0.24
BRD9-207ENST00000489093 HELLSQ9NRZ9 838 aa16.56■□□□□ 0.24
BRD9-207ENST00000489093 GSPT1P15170 499 aaKnown RBP16.55■□□□□ 0.24
BRD9-207ENST00000489093 SDSP20132 328 aa16.55■□□□□ 0.24
BRD9-207ENST00000489093 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
BRD9-207ENST00000489093 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
BRD9-207ENST00000489093 SKAP1Q86WV1 359 aa16.55■□□□□ 0.24
BRD9-207ENST00000489093 NACAP1Q9BZK3 213 aa16.55■□□□□ 0.24
BRD9-207ENST00000489093 TXNRD2Q9NNW7 524 aa16.55■□□□□ 0.24
BRD9-207ENST00000489093 TACC3Q9Y6A5 838 aa16.55■□□□□ 0.24
BRD9-207ENST00000489093 HERVK_113P62684 666 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 CTDSPL2Q05D32 466 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 PPARAQ07869 468 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 MCMDC2Q4G0Z9 681 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 SPICE1Q8N0Z3 855 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 RPAP3Q9H6T3 665 aaPredicted RBP16.54■□□□□ 0.24
BRD9-207ENST00000489093 MKNK2Q9HBH9 465 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 INCENPQ9NQS7 918 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 GABRQQ9UN88 632 aa16.54■□□□□ 0.24
BRD9-207ENST00000489093 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
BRD9-207ENST00000489093 USP14P54578 494 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 FCGRTP55899 365 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 PRKCZQ05513 592 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 FAM110CQ1W6H9 321 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 TTC22Q5TAA0 569 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 SH3TC2Q8TF17 1288 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 PAGR1Q9BTK6 254 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 CENPFP49454 3210 aa16.53■□□□□ 0.24
BRD9-207ENST00000489093 GREB1LQ9C091 1923 aaPredicted RBP16.53■□□□□ 0.24
BRD9-207ENST00000489093 CCDC171Q6TFL3 1326 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L15C9J2P7 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 MYCP01106 439 aaPredicted RBP16.52■□□□□ 0.24
BRD9-207ENST00000489093 GCLCP48506 637 aaPredicted RBP16.52■□□□□ 0.24
BRD9-207ENST00000489093 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 FAM47AQ5JRC9 791 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 CWC27Q6UX04 472 aaKnown RBP16.52■□□□□ 0.24
BRD9-207ENST00000489093 CATSPERGQ6ZRH7 1159 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 IL25Q9H293 177 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 TMX2Q9Y320 296 aa16.52■□□□□ 0.24
BRD9-207ENST00000489093 MGAMO43451 1857 aa16.51■□□□□ 0.23
BRD9-207ENST00000489093 TNPO2O14787 897 aaKnown RBP16.51■□□□□ 0.23
BRD9-207ENST00000489093 CNMDO75829 334 aa16.51■□□□□ 0.23
BRD9-207ENST00000489093 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms