RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TP53INP2Q8IXH6 220 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 MFSD4AQ8N468 514 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 BAHD1Q8TBE0 780 aaPredicted RBP6.32□□□□□ -1.4
RFC4-213ENST00000489028 MISP3Q96FF7 219 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 HRASLS5Q96KN8 279 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 FBXL18Q96ME1 805 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 ADGRE2Q9UHX3 823 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 SLC22A31A6NKX4 558 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
RFC4-213ENST00000489028 GK5Q6ZS86 529 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 SLITRK4Q8IW52 837 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 STK11IPQ8N1F8 1099 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 NKD1Q969G9 470 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 Q96M66 194 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 HSPA12BQ96MM6 686 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 ANTXR1Q9H6X2 564 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 EHMT1Q9H9B1 1298 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 SEMA3GQ9NS98 782 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 CEP131Q9UPN4 1083 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 ST14Q9Y5Y6 855 aa6.31□□□□□ -1.4
RFC4-213ENST00000489028 CLCN7P51798 805 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 TNK2Q07912 1038 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 ARSHQ5FYA8 562 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 OVOS1Q6IE37 1185 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 KIF2CQ99661 725 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 ADAMTS6Q9UKP5 1117 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 SNX11Q9Y5W9 270 aa6.3□□□□□ -1.4
RFC4-213ENST00000489028 FAM155AB1AL88 458 aaPredicted RBP6.29□□□□□ -1.4
RFC4-213ENST00000489028 H3BS24 57 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 LRRN2O75325 713 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 FUT4P22083 530 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 ETV3P41162 512 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 ZNF746Q6NUN9 644 aaPredicted RBP6.29□□□□□ -1.4
RFC4-213ENST00000489028 CBLL1Q75N03 491 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 NT5DC4Q86YG4 428 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 REXO1Q8N1G1 1221 aaKnown RBP6.29□□□□□ -1.4
RFC4-213ENST00000489028 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 GMIPQ9P107 970 aa6.29□□□□□ -1.4
RFC4-213ENST00000489028 WASH4PA8MWX3 477 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 UBOX5O94941 541 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
RFC4-213ENST00000489028 MCM4P33991 863 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 PLCL1Q15111 1095 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 ATG4CQ96DT6 458 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 CCDC74BQ96LY2 380 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
RFC4-213ENST00000489028 PODXL2Q9NZ53 605 aa6.28□□□□□ -1.4
RFC4-213ENST00000489028 RGS13O14921 159 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 CYP7A1P22680 504 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 KIR3DL1P43629 444 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 ZNF165P49910 485 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 IRAK1P51617 712 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 RAD51AP2Q09MP3 1159 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 PAK2Q13177 524 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 ZNF792Q3KQV3 632 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 MCTP1Q6DN14 999 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 PHACTR4Q8IZ21 702 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 AGBL5Q8NDL9 886 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 ASB11Q8WXH4 323 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 COX4I2Q96KJ9 171 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 KREMEN1Q96MU8 473 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 CNNM2Q9H8M5 875 aa6.27□□□□□ -1.41
RFC4-213ENST00000489028 MEIS3P2A8K0S8 358 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
RFC4-213ENST00000489028 TNNI2P48788 182 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 IKZF1Q13422 519 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 ANGEL2Q5VTE6 544 aaKnown RBP6.26□□□□□ -1.41
RFC4-213ENST00000489028 CDCP2Q5VXM1 449 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 ZNF654Q8IZM8 581 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 DTWD2Q8NBA8 298 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 RNF141Q8WVD5 230 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 TMEM40Q8WWA1 233 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 VWCEQ96DN2 955 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 DUSP15Q9H1R2 295 aaPredicted RBP6.26□□□□□ -1.41
RFC4-213ENST00000489028 ZNRF3Q9ULT6 936 aa6.26□□□□□ -1.41
RFC4-213ENST00000489028 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.26□□□□□ -1.41
RFC4-213ENST00000489028 RAG1P15918 1043 aa6.25□□□□□ -1.41
RFC4-213ENST00000489028 TAL1P17542 331 aaPredicted RBP6.25□□□□□ -1.41
RFC4-213ENST00000489028 MLECQ14165 292 aa6.25□□□□□ -1.41
RFC4-213ENST00000489028 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
RFC4-213ENST00000489028 PIWIL2Q8TC59 973 aaKnown RBP6.25□□□□□ -1.41
RFC4-213ENST00000489028 UBE2FQ969M7 185 aa6.25□□□□□ -1.41
RFC4-213ENST00000489028 ZSWIM5Q9P217 1185 aa6.25□□□□□ -1.41
RFC4-213ENST00000489028 PPT2Q9UMR5 302 aa6.25□□□□□ -1.41
RFC4-213ENST00000489028 NME1P15531 152 aaKnown RBP6.24□□□□□ -1.41
RFC4-213ENST00000489028 ZP2Q05996 745 aa6.24□□□□□ -1.41
RFC4-213ENST00000489028 THAP5Q7Z6K1 395 aa6.24□□□□□ -1.41
RFC4-213ENST00000489028 LRRN4CLQ8ND94 238 aa6.24□□□□□ -1.41
RFC4-213ENST00000489028 CARS2Q9HA77 564 aaKnown RBP6.24□□□□□ -1.41
RFC4-213ENST00000489028 GINM1Q9NU53 330 aa6.24□□□□□ -1.41
RFC4-213ENST00000489028 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 ESR1P03372 595 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 ACRP10323 421 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 SRFP11831 508 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 GBP1P32455 592 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 GAB4Q2WGN9 574 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms