RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
CLDN11-208ENST00000488989 GLIS2Q9BZE0 524 aaPredicted RBP18.79■□□□□ 0.6
CLDN11-208ENST00000488989 TRPM7Q96QT4 1865 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 KLF18A0A0U1RQI7 1052 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 CTNND1O60716 968 aaKnown RBP18.78■□□□□ 0.6
CLDN11-208ENST00000488989 GDF11O95390 407 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 LARGE1O95461 756 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 PDIA3P30101 505 aaKnown RBP18.78■□□□□ 0.6
CLDN11-208ENST00000488989 APOA5Q6Q788 366 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 NOL8Q76FK4 1167 aaKnown RBP18.78■□□□□ 0.6
CLDN11-208ENST00000488989 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 LARP6Q9BRS8 491 aaKnown RBP18.78■□□□□ 0.6
CLDN11-208ENST00000488989 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 CABP5Q9NP86 173 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 NYAP2Q9P242 653 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 ZBTB21Q9ULJ3 1066 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 PHIPQ8WWQ0 1821 aa18.78■□□□□ 0.6
CLDN11-208ENST00000488989 CCDC69A6NI79 296 aa18.77■□□□□ 0.6
CLDN11-208ENST00000488989 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.6
CLDN11-208ENST00000488989 PFKFB2O60825 505 aa18.77■□□□□ 0.6
CLDN11-208ENST00000488989 GH2P01242 217 aa18.77■□□□□ 0.6
CLDN11-208ENST00000488989 SHROOM1Q2M3G4 852 aaPredicted RBP18.77■□□□□ 0.6
CLDN11-208ENST00000488989 MKL1Q969V6 931 aa18.77■□□□□ 0.6
CLDN11-208ENST00000488989 USP2O75604 605 aaPredicted RBP18.76■□□□□ 0.59
CLDN11-208ENST00000488989 TTLL1O95922 423 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 ASNSP08243 561 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 TOP1P11387 765 aaKnown RBP18.76■□□□□ 0.59
CLDN11-208ENST00000488989 ST3GAL1Q11201 340 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 SEPT2Q15019 361 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 MAP3K11Q16584 847 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
CLDN11-208ENST00000488989 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
CLDN11-208ENST00000488989 DLK2Q6UY11 383 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 NFXL1Q6ZNB6 911 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 ZNF654Q8IZM8 581 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 ZNF526Q8TF50 670 aaPredicted RBP18.76■□□□□ 0.59
CLDN11-208ENST00000488989 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 SYNPO2Q9UMS6 1093 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 HPS5Q9UPZ3 1129 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 SLC12A7Q9Y666 1083 aa18.76■□□□□ 0.59
CLDN11-208ENST00000488989 DDAH1O94760 285 aa18.75■□□□□ 0.59
CLDN11-208ENST00000488989 NF2P35240 595 aa18.75■□□□□ 0.59
CLDN11-208ENST00000488989 TROAPQ12815 778 aa18.75■□□□□ 0.59
CLDN11-208ENST00000488989 SIAH1Q8IUQ4 282 aa18.75■□□□□ 0.59
CLDN11-208ENST00000488989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLDN11-208ENST00000488989 GTF3C6Q969F1 213 aa18.75■□□□□ 0.59
CLDN11-208ENST00000488989 MAP3K14Q99558 947 aa18.75■□□□□ 0.59
CLDN11-208ENST00000488989 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
CLDN11-208ENST00000488989 GOLGA8BA8MQT2 603 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 ZBTB43O43298 467 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 PPP1R12BO60237 982 aaPredicted RBP18.74■□□□□ 0.59
CLDN11-208ENST00000488989 CALM1P0DP23 149 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 CALM2P0DP24 149 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 CALM3P0DP25 149 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 INPP5BP32019 993 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 ICA1Q05084 483 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 SCRN1Q12765 414 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 PPP2R5BQ15173 497 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 SYNE3Q6ZMZ3 975 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 CATIPQ7Z7H3 387 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 PNMA1Q8ND90 353 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
CLDN11-208ENST00000488989 WRNIP1Q96S55 665 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
CLDN11-208ENST00000488989 KAT14Q9H8E8 782 aa18.74■□□□□ 0.59
CLDN11-208ENST00000488989 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
CLDN11-208ENST00000488989 CHADLQ6NUI6 762 aa18.73■□□□□ 0.59
CLDN11-208ENST00000488989 CLEC10AQ8IUN9 316 aa18.73■□□□□ 0.59
CLDN11-208ENST00000488989 SCYL3Q8IZE3 742 aa18.73■□□□□ 0.59
CLDN11-208ENST00000488989 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
CLDN11-208ENST00000488989 CLIP2Q9UDT6 1046 aa18.73■□□□□ 0.59
CLDN11-208ENST00000488989 METAP2P50579 478 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLDN11-208ENST00000488989 MAP3K9P80192 1104 aa18.72■□□□□ 0.59
CLDN11-208ENST00000488989 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
CLDN11-208ENST00000488989 NECAB1Q8N987 351 aa18.72■□□□□ 0.59
CLDN11-208ENST00000488989 GPBP1L1Q9HC44 474 aaPredicted RBP18.72■□□□□ 0.59
CLDN11-208ENST00000488989 FAM217BQ9NTX9 383 aaPredicted RBP18.72■□□□□ 0.59
CLDN11-208ENST00000488989 MYH6P13533 1939 aa18.72■□□□□ 0.59
CLDN11-208ENST00000488989 PTPRFP10586 1907 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 UNCXA6NJT0 531 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 GOLGA8AA7E2F4 631 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 KIF3CO14782 793 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 ITGBL1O95965 494 aaPredicted RBP18.71■□□□□ 0.59
CLDN11-208ENST00000488989 SNHG28P0DPA3 235 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
CLDN11-208ENST00000488989 SLC4A3P48751 1232 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 STK3Q13188 491 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.71■□□□□ 0.59
CLDN11-208ENST00000488989 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 CCDC83Q8IWF9 413 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 FANCBQ8NB91 859 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 MYL10Q9BUA6 226 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 ARHGEF10LQ9HCE6 1279 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 FZD1Q9UP38 647 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 TMX2Q9Y320 296 aa18.71■□□□□ 0.59
CLDN11-208ENST00000488989 USP17L5A8MUK1 530 aa18.7■□□□□ 0.58
CLDN11-208ENST00000488989 TRAF5O00463 557 aa18.7■□□□□ 0.58
CLDN11-208ENST00000488989 CCT2P78371 535 aaKnown RBP18.7■□□□□ 0.58
CLDN11-208ENST00000488989 GRM4Q14833 912 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms