RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PRR36Q9H6K5 1346 aa8□□□□□ -1.13
VPS8-224ENST00000488255 ETV3P41162 512 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 IRAK1P51617 712 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 RACK1P63244 317 aaKnown RBP7.99□□□□□ -1.13
VPS8-224ENST00000488255 PRKCQQ04759 706 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 CLCQ05315 142 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 PLCL1Q15111 1095 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 BAHD1Q8TBE0 780 aaPredicted RBP7.99□□□□□ -1.13
VPS8-224ENST00000488255 HSPA12BQ96MM6 686 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 KIF2CQ99661 725 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 LRRC3Q9BY71 257 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 CEP131Q9UPN4 1083 aa7.99□□□□□ -1.13
VPS8-224ENST00000488255 H3BS24 57 aa7.98□□□□□ -1.13
VPS8-224ENST00000488255 CHMP4BP1P59074 171 aa7.98□□□□□ -1.13
VPS8-224ENST00000488255 ARSHQ5FYA8 562 aa7.98□□□□□ -1.13
VPS8-224ENST00000488255 DNAJB8Q8NHS0 232 aa7.98□□□□□ -1.13
VPS8-224ENST00000488255 NT5C1AQ9BXI3 368 aa7.98□□□□□ -1.13
VPS8-224ENST00000488255 TNKS2Q9H2K2 1166 aa7.98□□□□□ -1.13
VPS8-224ENST00000488255 SLC22A31A6NKX4 558 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 GBP1P32455 592 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 HDLBPQ00341 1268 aaKnown RBP7.97□□□□□ -1.13
VPS8-224ENST00000488255 IKZF1Q13422 519 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 AGBL5Q8NDL9 886 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 PPP1R13LQ8WUF5 828 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 CCDC74BQ96LY2 380 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 DDX41Q9UJV9 622 aaKnown RBP7.97□□□□□ -1.13
VPS8-224ENST00000488255 SNX11Q9Y5W9 270 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 CAPN6Q9Y6Q1 641 aa7.97□□□□□ -1.13
VPS8-224ENST00000488255 RAG1P15918 1043 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 ZNF165P49910 485 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 TNK2Q07912 1038 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 METTL16Q86W50 562 aaKnown RBP7.96□□□□□ -1.14
VPS8-224ENST00000488255 NT5DC4Q86YG4 428 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 WFDC3Q8IUB2 231 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 SLFN12Q8IYM2 578 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 ASB11Q8WXH4 323 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 ANTXR1Q9H6X2 564 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 ATP13A1Q9HD20 1204 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 PRDM7Q9NQW5 492 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 ZSWIM5Q9P217 1185 aa7.96□□□□□ -1.14
VPS8-224ENST00000488255 LRRN2O75325 713 aa7.95□□□□□ -1.14
VPS8-224ENST00000488255 ZNF865P0CJ78 1059 aaPredicted RBP7.95□□□□□ -1.14
VPS8-224ENST00000488255 RBM25P49756 843 aaKnown RBP7.95□□□□□ -1.14
VPS8-224ENST00000488255 CLCN7P51798 805 aa7.95□□□□□ -1.14
VPS8-224ENST00000488255 FBXW10Q5XX13 1052 aa7.95□□□□□ -1.14
VPS8-224ENST00000488255 OVOS1Q6IE37 1185 aa7.95□□□□□ -1.14
VPS8-224ENST00000488255 SLITRK4Q8IW52 837 aa7.95□□□□□ -1.14
VPS8-224ENST00000488255 ZNF654Q8IZM8 581 aa7.95□□□□□ -1.14
VPS8-224ENST00000488255 GMIPQ9P107 970 aa7.95□□□□□ -1.14
VPS8-224ENST00000488255 ATE1O95260 518 aa7.94□□□□□ -1.14
VPS8-224ENST00000488255 POLR2BP30876 1174 aaKnown RBP7.94□□□□□ -1.14
VPS8-224ENST00000488255 PAK2Q13177 524 aa7.94□□□□□ -1.14
VPS8-224ENST00000488255 ANGEL2Q5VTE6 544 aaKnown RBP7.94□□□□□ -1.14
VPS8-224ENST00000488255 PI4K2BQ8TCG2 481 aa7.94□□□□□ -1.14
VPS8-224ENST00000488255 UBE2FQ969M7 185 aa7.94□□□□□ -1.14
VPS8-224ENST00000488255 EHMT1Q9H9B1 1298 aa7.94□□□□□ -1.14
VPS8-224ENST00000488255 ADGRE2Q9UHX3 823 aa7.94□□□□□ -1.14
VPS8-224ENST00000488255 PITPNM2Q9BZ72 1349 aa7.94□□□□□ -1.14
VPS8-224ENST00000488255 FAM86C2PA6NEL3 165 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 WASH4PA8MWX3 477 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 KIR3DL1P43629 444 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 ZP2Q05996 745 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 ZNF792Q3KQV3 632 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 C22orf34Q6ZV56 151 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 REXO1Q8N1G1 1221 aaKnown RBP7.93□□□□□ -1.14
VPS8-224ENST00000488255 Q96M66 194 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 KREMEN1Q96MU8 473 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 FERD3LQ96RJ6 166 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 SEMA3GQ9NS98 782 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.93□□□□□ -1.14
VPS8-224ENST00000488255 ST14Q9Y5Y6 855 aa7.93□□□□□ -1.14
VPS8-224ENST00000488255 TAL1P17542 331 aaPredicted RBP7.92□□□□□ -1.14
VPS8-224ENST00000488255 ATG4CQ96DT6 458 aa7.92□□□□□ -1.14
VPS8-224ENST00000488255 COX4I2Q96KJ9 171 aa7.92□□□□□ -1.14
VPS8-224ENST00000488255 CARS2Q9HA77 564 aaKnown RBP7.92□□□□□ -1.14
VPS8-224ENST00000488255 ADAMTS6Q9UKP5 1117 aa7.92□□□□□ -1.14
VPS8-224ENST00000488255 RGS13O14921 159 aa7.91□□□□□ -1.14
VPS8-224ENST00000488255 FUT4P22083 530 aa7.91□□□□□ -1.14
VPS8-224ENST00000488255 NLRC3Q7RTR2 1065 aa7.91□□□□□ -1.14
VPS8-224ENST00000488255 RC3H2Q9HBD1 1191 aaKnown RBP7.91□□□□□ -1.14
VPS8-224ENST00000488255 KCNH3Q9ULD8 1083 aa7.91□□□□□ -1.14
VPS8-224ENST00000488255 PPT2Q9UMR5 302 aa7.91□□□□□ -1.14
VPS8-224ENST00000488255 UBOX5O94941 541 aa7.9□□□□□ -1.14
VPS8-224ENST00000488255 RNASE1P07998 156 aaKnown RBP7.9□□□□□ -1.14
VPS8-224ENST00000488255 MCTP1Q6DN14 999 aa7.9□□□□□ -1.14
VPS8-224ENST00000488255 CCDC81Q6ZN84 652 aa7.9□□□□□ -1.14
VPS8-224ENST00000488255 DTWD2Q8NBA8 298 aa7.9□□□□□ -1.14
VPS8-224ENST00000488255 RNF141Q8WVD5 230 aa7.9□□□□□ -1.14
VPS8-224ENST00000488255 TMEM40Q8WWA1 233 aa7.9□□□□□ -1.14
VPS8-224ENST00000488255 ZNF512BQ96KM6 892 aaPredicted RBP7.9□□□□□ -1.14
VPS8-224ENST00000488255 MBNL3Q9NUK0 354 aaKnown RBP7.9□□□□□ -1.14
VPS8-224ENST00000488255 CREG2Q8IUH2 290 aa7.89□□□□□ -1.15
VPS8-224ENST00000488255 PIWIL2Q8TC59 973 aaKnown RBP7.89□□□□□ -1.15
VPS8-224ENST00000488255 ACBD3Q9H3P7 528 aa7.89□□□□□ -1.15
VPS8-224ENST00000488255 CNNM2Q9H8M5 875 aa7.89□□□□□ -1.15
VPS8-224ENST00000488255 GINM1Q9NU53 330 aa7.89□□□□□ -1.15
VPS8-224ENST00000488255 EFR3BQ9Y2G0 817 aa7.89□□□□□ -1.15
VPS8-224ENST00000488255 NME1P15531 152 aaKnown RBP7.88□□□□□ -1.15
VPS8-224ENST00000488255 TPP2P29144 1249 aaPredicted RBP7.88□□□□□ -1.15
VPS8-224ENST00000488255 LRRFIP1Q32MZ4 808 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms