RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TOMM22Q9NS69 142 aa20.37■□□□□ 0.85
SHROOM1-205ENST00000488072 IGKV6D-41A0A0C4DH26 115 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 ZNF213O14771 459 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 CYP21A2P08686 494 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 FGRP09769 529 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 CETPP11597 493 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 EEF2P13639 858 aaKnown RBP20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 MAP2K1Q02750 393 aaPredicted RBP20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 SREBF2Q12772 1141 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 STOX1Q6ZVD7 989 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 TMEM179Q6ZVK1 233 aa20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 ZNF444Q8N0Y2 327 aaPredicted RBP20.36■□□□□ 0.85
SHROOM1-205ENST00000488072 PCNTO95613 3336 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 RANBP6O60518 1105 aaKnown RBP20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 PEX10O60683 326 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 BACE1P56817 501 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 ICA1Q05084 483 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 PDE4BQ07343 736 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 AKNAD1Q5T1N1 836 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 CCDC17Q96LX7 622 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 IL17RBQ9NRM6 502 aa20.35■□□□□ 0.85
SHROOM1-205ENST00000488072 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
SHROOM1-205ENST00000488072 CYP2C8P10632 490 aa20.34■□□□□ 0.85
SHROOM1-205ENST00000488072 HSPA8P11142 646 aaKnown RBP20.34■□□□□ 0.85
SHROOM1-205ENST00000488072 STAG1Q8WVM7 1258 aa20.34■□□□□ 0.85
SHROOM1-205ENST00000488072 CEP95Q96GE4 821 aa20.34■□□□□ 0.85
SHROOM1-205ENST00000488072 ZKSCAN3Q9BRR0 538 aa20.34■□□□□ 0.85
SHROOM1-205ENST00000488072 AS3MTQ9HBK9 375 aa20.34■□□□□ 0.85
SHROOM1-205ENST00000488072 B4E1Z4 1266 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 USP17L10C9JJH3 530 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 PDHXO00330 501 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 ORC4O43929 436 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 ECM2O94769 699 aaPredicted RBP20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 CRHR2Q13324 411 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 IMMTQ16891 758 aaKnown RBP20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 SH3D19Q5HYK7 790 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 RASGRP2Q7LDG7 609 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 NEDD1Q8NHV4 660 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 FEZ1Q99689 392 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 GINM1Q9NU53 330 aa20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
SHROOM1-205ENST00000488072 TSPY3P0CV98 308 aa20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 TSPY8P0CW00 308 aa20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 LBX1P52954 281 aa20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 MFSD6Q6ZSS7 791 aa20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 SPICE1Q8N0Z3 855 aa20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 LRRC47Q8N1G4 583 aaKnown RBP20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 CLIP2Q9UDT6 1046 aa20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 CTNNA3Q9UI47 895 aa20.32■□□□□ 0.84
SHROOM1-205ENST00000488072 TSPY2A6NKD2 308 aa20.31■□□□□ 0.84
SHROOM1-205ENST00000488072 SLC27A2O14975 620 aa20.31■□□□□ 0.84
SHROOM1-205ENST00000488072 INHBEP58166 350 aa20.31■□□□□ 0.84
SHROOM1-205ENST00000488072 CAP1Q01518 475 aa20.31■□□□□ 0.84
SHROOM1-205ENST00000488072 CYB5R4Q7L1T6 521 aa20.31■□□□□ 0.84
SHROOM1-205ENST00000488072 ANKRD23Q86SG2 305 aa20.31■□□□□ 0.84
SHROOM1-205ENST00000488072 KDM4AO75164 1064 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 SEC24BO95487 1268 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 NECTIN1Q15223 517 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 TAF1CQ15572 869 aaPredicted RBP20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 CREB3L3Q68CJ9 461 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 USP17L2Q6R6M4 530 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 POTEEQ6S8J3 1075 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 CHST3Q7LGC8 479 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 RASEFQ8IZ41 740 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 NUP88Q99567 741 aaPredicted RBP20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 BEGAINQ9BUH8 593 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 KIAA1683Q9H0B3 1180 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 KANSL2Q9H9L4 492 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 MTMR4Q9NYA4 1195 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 TMX2Q9Y320 296 aa20.3■□□□□ 0.84
SHROOM1-205ENST00000488072 PTPRFP10586 1907 aa20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 GREB1LQ9C091 1923 aaPredicted RBP20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 E7EWF7 191 aa20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 RAD21O60216 631 aa20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 CASC1Q6TDU7 716 aa20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 FASTKD5Q7L8L6 764 aaKnown RBP20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 CPA4Q9UI42 421 aa20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 AGTPBP1Q9UPW5 1226 aa20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 MYH8P13535 1937 aa20.29■□□□□ 0.84
SHROOM1-205ENST00000488072 VCAM1P19320 739 aa20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 REM2Q8IYK8 340 aaPredicted RBP20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 P2RX7Q99572 595 aaKnown RBP20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 ZNF287Q9HBT7 754 aa20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 TMOD4Q9NZQ9 345 aa20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 ZSWIM5Q9P217 1185 aa20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 TAOK2Q9UL54 1235 aa20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 MTMR7Q9Y216 660 aa20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 PLIN4Q96Q06 1357 aa20.28■□□□□ 0.84
SHROOM1-205ENST00000488072 C19orf81C9J6K1 198 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 CA12O43570 354 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 RCSD1Q6JBY9 416 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 PROCA1Q8NCQ7 364 aaPredicted RBP20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 TBC1D2Q9BYX2 928 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 RPAP3Q9H6T3 665 aaPredicted RBP20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 VCPKMTQ9H867 229 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 SENP2Q9HC62 589 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 ARHGEF10LQ9HCE6 1279 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 GPHNQ9NQX3 736 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms