RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 HNRNPMP52272 730 aaKnown RBP eCLIP4.57□□□□□ -1.68
GPNMB-212ENST00000487890 C19orf57Q0VDD7 668 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 CBX2Q14781 532 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-212ENST00000487890 NCAPHQ15003 741 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 POU4F3Q15319 338 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 FOXB2Q5VYV0 432 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 KIAA1211LQ6NV74 962 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 SV2AQ7L0J3 742 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 EEPD1Q7L9B9 569 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 NLRC3Q7RTR2 1065 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 HDXQ7Z353 690 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 FCHSD1Q86WN1 690 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 C12orf40Q86WS4 652 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 DHX37Q8IY37 1157 aaKnown RBP4.57□□□□□ -1.68
GPNMB-212ENST00000487890 SYNPOQ8N3V7 929 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 IL22RA1Q8N6P7 574 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 ZBTB38Q8NAP3 1195 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-212ENST00000487890 ZSWIM2Q8NEG5 633 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 NUDT8Q8WV74 236 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 KLHL6Q8WZ60 621 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 IER2Q9BTL4 223 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 CNNM2Q9H8M5 875 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 AVENQ9NQS1 362 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-212ENST00000487890 SLC52A1Q9NWF4 448 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 SUGT1Q9Y2Z0 365 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 PPME1Q9Y570 386 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 CSADQ9Y600 493 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 C3P01024 1663 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 TIAM1Q13009 1591 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 ATP7AQ04656 1500 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 ARHGEF12Q9NZN5 1544 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 GPATCH8Q9UKJ3 1502 aaKnown RBP4.56□□□□□ -1.68
GPNMB-212ENST00000487890 PLEKHH2Q8IVE3 1493 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 LMTK3Q96Q04 1460 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 NRG2O14511 850 aaPredicted RBP4.56□□□□□ -1.68
GPNMB-212ENST00000487890 TNFRSF10CO14798 259 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 SUSD5O60279 629 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 S100BP04271 92 aaPredicted RBP4.56□□□□□ -1.68
GPNMB-212ENST00000487890 CYP11A1P05108 521 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 SNRPBP14678 240 aaKnown RBP4.56□□□□□ -1.68
GPNMB-212ENST00000487890 SLC10A6Q3KNW5 377 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 TM4SF20Q53R12 229 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 TAF7LQ5H9L4 462 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 TMEM67Q5HYA8 995 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 CDCP2Q5VXM1 449 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 TRIM47Q96LD4 638 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 CORO1BQ9BR76 489 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 PHAXQ9H814 394 aaKnown RBP4.56□□□□□ -1.68
GPNMB-212ENST00000487890 KRT82Q9NSB4 513 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 PLAAQ9Y263 795 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 STARD13Q9Y3M8 1113 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 SLC12A7Q9Y666 1083 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 MLH3Q9UHC1 1453 aa4.56□□□□□ -1.68
GPNMB-212ENST00000487890 CLTCQ00610 1675 aaKnown RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ADGBQ8N7X0 1667 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ELOA3CA0A087WX78 387 aaPredicted RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 A0A087X0B3 334 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ELOA3DA6NLF2 546 aaPredicted RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 FSCN2O14926 492 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 RGS20O76081 388 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 MYCLP1P12525 358 aaPredicted RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 MX2P20592 715 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ADH6P28332 368 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 POLR2BP30876 1174 aaKnown RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 L1CAMP32004 1257 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 GRK4P32298 578 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ARL4DP49703 201 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 CDKN1CP49918 316 aaPredicted RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 PIP4K2BP78356 416 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 SLC7A5Q01650 507 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 PABPC4Q13310 644 aaKnown RBP eCLIP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 GAS6Q14393 721 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ELOA3BQ3SY89 546 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 GNPTABQ3T906 1256 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 TMEM201Q5SNT2 666 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 CCDC181Q5TID7 509 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 THNSL2Q86YJ6 484 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 NIM1KQ8IY84 436 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 CACTIN-AS1Q8N1I8 211 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 PRPF38AQ8NAV1 312 aaKnown RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ELOA3Q8NG57 546 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 NINJ1Q92982 152 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ELMO3Q96BJ8 720 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ACSF2Q96CM8 615 aaPredicted RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 KLHDC7BQ96G42 594 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 SLC26A8Q96RN1 970 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 CARD10Q9BWT7 1032 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 SENP2Q9HC62 589 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 KLHL3Q9UH77 587 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ZNF214Q9UL59 606 aaPredicted RBP4.55□□□□□ -1.68
GPNMB-212ENST00000487890 TACC3Q9Y6A5 838 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 UHRF1BP1Q6BDS2 1440 aa4.55□□□□□ -1.68
GPNMB-212ENST00000487890 ZNF644Q9H582 1327 aaPredicted RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 REREQ9P2R6 1566 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 INO80Q9ULG1 1556 aaPredicted RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 IRS4O14654 1257 aaPredicted RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 TM4SF5O14894 197 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 KCNQ2O43526 872 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 DLGAP3O95886 979 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 PGRP06401 933 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms