RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 CTCFLQ8NI51 663 aaPredicted RBP9.36□□□□□ -0.91
ZNF541-204ENST00000487275 GPRC5DQ9NZD1 345 aa9.36□□□□□ -0.91
ZNF541-204ENST00000487275 ORC3Q9UBD5 711 aaPredicted RBP9.36□□□□□ -0.91
ZNF541-204ENST00000487275 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
ZNF541-204ENST00000487275 CNTNAP1P78357 1384 aa9.36□□□□□ -0.91
ZNF541-204ENST00000487275 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 PPFIA3O75145 1194 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 DDNO94850 711 aaPredicted RBP9.35□□□□□ -0.91
ZNF541-204ENST00000487275 EGFRP00533 1210 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 ZSCAN22P10073 491 aaPredicted RBP9.35□□□□□ -0.91
ZNF541-204ENST00000487275 TOP1P11387 765 aaKnown RBP9.35□□□□□ -0.91
ZNF541-204ENST00000487275 KIF5BP33176 963 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 FOSBP53539 338 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 TROAPQ12815 778 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 NFKBIBQ15653 356 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 TATDN1Q6P1N9 297 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
ZNF541-204ENST00000487275 TRIM22Q8IYM9 498 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 PNMA1Q8ND90 353 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 CEP95Q96GE4 821 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 TMEM47Q9BQJ4 181 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 SLC26A6Q9BXS9 759 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 TMEM39BQ9GZU3 492 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 DNAJC18Q9H819 358 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.35□□□□□ -0.91
ZNF541-204ENST00000487275 FAM217BQ9NTX9 383 aaPredicted RBP9.35□□□□□ -0.91
ZNF541-204ENST00000487275 HACL1Q9UJ83 578 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 MTMR6Q9Y217 621 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 ZDHHC9Q9Y397 364 aa9.35□□□□□ -0.91
ZNF541-204ENST00000487275 STK36Q9NRP7 1315 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 SOCS7O14512 581 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 FMNL1O95466 1100 aaPredicted RBP9.34□□□□□ -0.91
ZNF541-204ENST00000487275 TTLL1O95922 423 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 F13A1P00488 732 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 FDPSP14324 419 aaKnown RBP9.34□□□□□ -0.91
ZNF541-204ENST00000487275 IFNAR1P17181 557 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 GNAQP50148 359 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 AKAP17AQ02040 695 aaKnown RBP9.34□□□□□ -0.91
ZNF541-204ENST00000487275 NBR1Q14596 966 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 RASA3Q14644 834 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 NTRK3Q16288 839 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 ABCB5Q2M3G0 1257 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 TMEM179Q6ZVK1 233 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 APOBEC3FQ8IUX4 373 aaKnown RBP9.34□□□□□ -0.91
ZNF541-204ENST00000487275 WASF1Q92558 559 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 PHKBQ93100 1093 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 C8orf76Q96K31 380 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 MAP3K14Q99558 947 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
ZNF541-204ENST00000487275 CABP5Q9NP86 173 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 MTMR4Q9NYA4 1195 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 MTMR7Q9Y216 660 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 ATP6V1DQ9Y5K8 247 aa9.34□□□□□ -0.91
ZNF541-204ENST00000487275 DICER1Q9UPY3 1922 aaKnown RBP9.34□□□□□ -0.91
ZNF541-204ENST00000487275 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 GOLGA6L22H0YM25 854 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 TBC1D12O60347 775 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 GDF11O95390 407 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 BAG4O95429 457 aaKnown RBP9.33□□□□□ -0.92
ZNF541-204ENST00000487275 MCM4P33991 863 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 EPS15P42566 896 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 NOVP48745 357 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 ATP2B2Q01814 1243 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 TRIM29Q14134 588 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 GRM4Q14833 912 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 ANGEL2Q5VTE6 544 aaKnown RBP9.33□□□□□ -0.92
ZNF541-204ENST00000487275 TMTC3Q6ZXV5 915 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 CDC37L1Q7L3B6 337 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 TRPM4Q8TD43 1214 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 ALG1Q9BT22 464 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 KANSL2Q9H9L4 492 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 ADARB2Q9NS39 739 aaKnown RBP9.33□□□□□ -0.92
ZNF541-204ENST00000487275 CLIP2Q9UDT6 1046 aa9.33□□□□□ -0.92
ZNF541-204ENST00000487275 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
ZNF541-204ENST00000487275 ZC3H4Q9UPT8 1303 aaKnown RBP9.32□□□□□ -0.92
ZNF541-204ENST00000487275 SBF1O95248 1867 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 PLEKHA8P1O95397 391 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 DEXIO95424 95 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 GH2P01242 217 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
ZNF541-204ENST00000487275 PTMSP20962 102 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 ICA1Q05084 483 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 CLEC17AQ6ZS10 378 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 MIGA2Q7L4E1 593 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 NBPF11Q86T75 865 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 CMTR1Q8N1G2 835 aaKnown RBP9.32□□□□□ -0.92
ZNF541-204ENST00000487275 LRRC47Q8N1G4 583 aaKnown RBP9.32□□□□□ -0.92
ZNF541-204ENST00000487275 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 LZTS2Q9BRK4 669 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 RNF26Q9BY78 433 aaPredicted RBP9.32□□□□□ -0.92
ZNF541-204ENST00000487275 DEFB129Q9H1M3 183 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 GGA3Q9NZ52 723 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 SCAF8Q9UPN6 1271 aaKnown RBP9.32□□□□□ -0.92
ZNF541-204ENST00000487275 SIPA1L1O43166 1804 aa9.32□□□□□ -0.92
ZNF541-204ENST00000487275 MYH8P13535 1937 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms