RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
MCF2L-227ENST00000486806 LIFRP42702 1097 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 IREB2P48200 963 aaKnown RBP11.26□□□□□ -0.61
MCF2L-227ENST00000486806 AK2P54819 239 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 ICA1Q05084 483 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 PRKG1Q13976 671 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
MCF2L-227ENST00000486806 CCDC178Q5BJE1 867 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 TMEM67Q5HYA8 995 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 LDLRAD1Q5T700 205 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 CST9Q5W186 159 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 Q6ZUG5 572 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 SGMS1Q86VZ5 419 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 DGKHQ86XP1 1220 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 ZKSCAN4Q969J2 545 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-227ENST00000486806 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 SENP2Q9HC62 589 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 CABP5Q9NP86 173 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
MCF2L-227ENST00000486806 ST18O60284 1047 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 TTLL1O95922 423 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 PTPRAP18433 802 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 EVCP57679 992 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 FSTL1Q12841 308 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 WTAPQ15007 396 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 SIAH1Q8IUQ4 282 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 ANKRD13AQ8IZ07 590 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 BRF1Q92994 677 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 ZNF408Q9H9D4 720 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 GBA2Q9HCG7 927 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-227ENST00000486806 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 NID2Q14112 1375 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 MYH8P13535 1937 aa11.25□□□□□ -0.61
MCF2L-227ENST00000486806 ERICH2A1L162 156 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
MCF2L-227ENST00000486806 IFIT1BQ5T764 474 aaKnown RBP11.24□□□□□ -0.61
MCF2L-227ENST00000486806 CCDC84Q86UT8 332 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-227ENST00000486806 SNX21Q969T3 373 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 MKL1Q969V6 931 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 CLMNQ96JQ2 1002 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 PICK1Q9NRD5 415 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 BRPF3Q9ULD4 1205 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
MCF2L-227ENST00000486806 ATAD5Q96QE3 1844 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 A0A1W2PRG0 241 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 USP17L5A8MUK1 530 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
MCF2L-227ENST00000486806 RCAN1P53805 252 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 APOBRQ0VD83 1088 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 TROAPQ12815 778 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-227ENST00000486806 APOA5Q6Q788 366 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 TMTC2Q8N394 836 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 ACER1Q8TDN7 264 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 WDR18Q9BV38 432 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 TBC1D2Q9BYX2 928 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 TPCN1Q9ULQ1 816 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 CSADQ9Y600 493 aa11.23□□□□□ -0.61
MCF2L-227ENST00000486806 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 DDAH1O94760 285 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 LARGE1O95461 756 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 SNHG28P0DPA3 235 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 ECE1P42892 770 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 MCM2P49736 904 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 FGD1P98174 961 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 ZNF654Q8IZM8 581 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
MCF2L-227ENST00000486806 C2orf69Q8N8R5 385 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 PNMA1Q8ND90 353 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 GMCL1P1Q8NEA9 526 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 KAT14Q9H8E8 782 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 ARHGEF10LQ9HCE6 1279 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 CLIP2Q9UDT6 1046 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 TMX2Q9Y320 296 aa11.22□□□□□ -0.61
MCF2L-227ENST00000486806 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
MCF2L-227ENST00000486806 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 PHIPQ8WWQ0 1821 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 CCDC69A6NI79 296 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.61
MCF2L-227ENST00000486806 PPATQ06203 517 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 ST3GAL1Q11201 340 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 ME3Q16798 604 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 NFXL1Q6ZNB6 911 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 NOL8Q76FK4 1167 aaKnown RBP11.21□□□□□ -0.61
MCF2L-227ENST00000486806 RASGRP2Q7LDG7 609 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 SAPCD2Q86UD0 394 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 ERO1BQ86YB8 467 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms