RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DYNLL2Q96FJ2 89 aa15.45■□□□□ 0.06
CHMP3-208ENST00000486404 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
CHMP3-208ENST00000486404 MYH4Q9Y623 1939 aa15.45■□□□□ 0.06
CHMP3-208ENST00000486404 APPP05067 770 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 CTGFP29279 349 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 PRKCZQ05513 592 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 C12orf60Q5U649 245 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 TMEM179Q6ZVK1 233 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 OSBP2Q969R2 916 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 STRBPQ96SI9 672 aaKnown RBP15.44■□□□□ 0.06
CHMP3-208ENST00000486404 TMEM106CQ9BVX2 250 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 GREB1LQ9C091 1923 aaPredicted RBP15.44■□□□□ 0.06
CHMP3-208ENST00000486404 DOCK3Q8IZD9 2030 aa15.44■□□□□ 0.06
CHMP3-208ENST00000486404 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 M0R2C6 588 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 MYCP01106 439 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-208ENST00000486404 ICA1Q05084 483 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 SEPT2Q15019 361 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 B4GALNT3Q6L9W6 998 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 C16orf86Q6ZW13 317 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 SH3TC2Q8TF17 1288 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 GTF3C2Q8WUA4 911 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-208ENST00000486404 COA7Q96BR5 231 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 ZNF333Q96JL9 665 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 NACAP1Q9BZK3 213 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 KIAA1683Q9H0B3 1180 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 SH2D4AQ9H788 454 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 ARHGEF10LQ9HCE6 1279 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 KIAA0100Q14667 2235 aaKnown RBP15.43■□□□□ 0.06
CHMP3-208ENST00000486404 PARP14Q460N5 1801 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 A0A0G2JMZ2 1700 aa15.43■□□□□ 0.06
CHMP3-208ENST00000486404 ROBO3Q96MS0 1386 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 AKR1B1P15121 316 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 VCAM1P19320 739 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 HOXA7P31268 230 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-208ENST00000486404 CDK8P49336 464 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 PDE1AP54750 535 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 HERVK_113P62684 666 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 GIMAP6Q6P9H5 292 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 CCAR1Q8IX12 1150 aaKnown RBP15.42■□□□□ 0.06
CHMP3-208ENST00000486404 ACER1Q8TDN7 264 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 C12orf42Q96LP6 360 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 CCDC17Q96LX7 622 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 CWC22Q9HCG8 908 aaKnown RBP15.42■□□□□ 0.06
CHMP3-208ENST00000486404 EMILIN3Q9NT22 766 aa15.42■□□□□ 0.06
CHMP3-208ENST00000486404 BIN2Q9UBW5 565 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-208ENST00000486404 MINDY4BA8MYZ0 360 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L15C9J2P7 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L13C9JLJ4 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L11C9JVI0 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L18D6R9N7 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L22D6RA61 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L17D6RBQ6 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L19D6RCP7 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L20D6RJB6 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 GRK4P32298 578 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 USP17L24Q0WX57 530 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 SMC5Q8IY18 1101 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 SLAIN1Q8ND83 568 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 EVI5LQ96CN4 794 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 PAGR1Q9BTK6 254 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 STAP2Q9UGK3 403 aa15.41■□□□□ 0.06
CHMP3-208ENST00000486404 PLXNB2O15031 1838 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 CENPFP49454 3210 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 GSG1L2A8MUP6 293 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 TRIM6-TRIM34B2RNG4 842 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 GUCY1A2P33402 732 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 CHD1LQ86WJ1 897 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 GPRC5AQ8NFJ5 357 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 P2RX7Q99572 595 aaKnown RBP15.4■□□□□ 0.06
CHMP3-208ENST00000486404 TANGO6Q9C0B7 1094 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 RPAP3Q9H6T3 665 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-208ENST00000486404 MKNK2Q9HBH9 465 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 ZNF287Q9HBT7 754 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 EPB41L4AQ9HCS5 686 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-208ENST00000486404 MORF4L1Q9UBU8 362 aa15.4■□□□□ 0.06
CHMP3-208ENST00000486404 PDE4DIPQ5VU43 2346 aa15.39■□□□□ 0.05
CHMP3-208ENST00000486404 COL11A1P12107 1806 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-208ENST00000486404 SLC3A2P08195 630 aaKnown RBP15.39■□□□□ 0.05
CHMP3-208ENST00000486404 FLT3LGP49771 235 aa15.39■□□□□ 0.05
CHMP3-208ENST00000486404 UBXN2AP68543 259 aa15.39■□□□□ 0.05
CHMP3-208ENST00000486404 IRX6P78412 446 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-208ENST00000486404 SBK1Q52WX2 424 aa15.39■□□□□ 0.05
CHMP3-208ENST00000486404 ZMYM1Q5SVZ6 1142 aa15.39■□□□□ 0.05
CHMP3-208ENST00000486404 NAPBQ9H115 298 aa15.39■□□□□ 0.05
CHMP3-208ENST00000486404 GABRQQ9UN88 632 aa15.39■□□□□ 0.05
CHMP3-208ENST00000486404 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 SMIM22K7EJ46 135 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 RAD21O60216 631 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 ADCY3O60266 1144 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 ERVK-24P63145 666 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 NUCB1Q02818 461 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 LPAR1Q92633 364 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 SEC62Q99442 399 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms