RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 GCLCP48506 637 aaPredicted RBP13.22□□□□□ -0.29
SNX21-211ENST00000486336 TDO2P48775 406 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 RGS19P49795 217 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 USP14P54578 494 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 PRMT2P55345 433 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 SH3TC2Q8TF17 1288 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
SNX21-211ENST00000486336 STAP2Q9UGK3 403 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 ZSWIM8A7E2V4 1837 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
SNX21-211ENST00000486336 AKR1B1P15121 316 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 GNAT2P19087 354 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
SNX21-211ENST00000486336 ATP2B2Q01814 1243 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 PRKCZQ05513 592 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 TMEM179Q6ZVK1 233 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 C16orf86Q6ZW13 317 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 SMC5Q8IY18 1101 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 COA7Q96BR5 231 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 EVI5LQ96CN4 794 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.29
SNX21-211ENST00000486336 GABRQQ9UN88 632 aa13.21□□□□□ -0.29
SNX21-211ENST00000486336 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 PEX10O60683 326 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 HERVK_113P62684 666 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 ZMYM1Q5SVZ6 1142 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
SNX21-211ENST00000486336 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 ARMC5Q96C12 935 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 CCDC17Q96LX7 622 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 PAGR1Q9BTK6 254 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 KIAA1683Q9H0B3 1180 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
SNX21-211ENST00000486336 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
SNX21-211ENST00000486336 RAD21O60216 631 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 NUCB1Q02818 461 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 ICA1Q05084 483 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 GIMAP6Q6P9H5 292 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 CLEC10AQ8IUN9 316 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 ZNF333Q96JL9 665 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 C12orf42Q96LP6 360 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
SNX21-211ENST00000486336 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
SNX21-211ENST00000486336 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
SNX21-211ENST00000486336 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 VCAM1P19320 739 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 GRK4P32298 578 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 FLT3LGP49771 235 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
SNX21-211ENST00000486336 CATSPERGQ6ZRH7 1159 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 GPRC5AQ8NFJ5 357 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 NAPBQ9H115 298 aa13.18□□□□□ -0.3
SNX21-211ENST00000486336 EPB41L4AQ9HCS5 686 aaPredicted RBP13.18□□□□□ -0.3
SNX21-211ENST00000486336 ADCY3O60266 1144 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 Q3C1V9 767 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 ZNF444Q8N0Y2 327 aaPredicted RBP13.17□□□□□ -0.3
SNX21-211ENST00000486336 SPICE1Q8N0Z3 855 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 GTF3C2Q8WUA4 911 aaPredicted RBP13.17□□□□□ -0.3
SNX21-211ENST00000486336 TANGO6Q9C0B7 1094 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 TXNRD2Q9NNW7 524 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
SNX21-211ENST00000486336 MGAMO43451 1857 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 MYH8P13535 1937 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 PRDM1O75626 825 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
SNX21-211ENST00000486336 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
SNX21-211ENST00000486336 ELNP15502 786 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 EN2P19622 333 aaPredicted RBP13.16□□□□□ -0.3
SNX21-211ENST00000486336 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 ERVK-24P63145 666 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 UBXN2AP68543 259 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 MTFR1Q15390 333 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 FAM227BQ96M60 508 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms