RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 VPS37BQ9H9H4 285 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 RNF8O76064 485 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 C8orf34Q49A92 452 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
GABRE-209ENST00000486255 CLTAP09496 248 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 CALML3P27482 149 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 KRT71Q3SY84 523 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 ATL3Q6DD88 541 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 NXNQ6DKJ4 435 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 P3H4Q92791 437 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 RAB17Q9H0T7 212 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 PIK3R4Q99570 1358 aa9.72□□□□□ -0.85
GABRE-209ENST00000486255 CTNNA1P35221 906 aaKnown RBP9.71□□□□□ -0.85
GABRE-209ENST00000486255 APOBRQ0VD83 1088 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 CLTCQ00610 1675 aaKnown RBP9.71□□□□□ -0.85
GABRE-209ENST00000486255 STX10O60499 249 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.85
GABRE-209ENST00000486255 CBX8Q9HC52 389 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 A0A1B0GVL5 298 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 PTPDC1A2A3K4 754 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 GUCY2FP51841 1108 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.85
GABRE-209ENST00000486255 IQUBQ8NA54 791 aa9.71□□□□□ -0.85
GABRE-209ENST00000486255 DAPK3O43293 454 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 NLRP12P59046 1061 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 TRAF1Q13077 416 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 CCDC105Q8IYK2 499 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 CFAP61Q8NHU2 1237 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 CLSTN2Q9H4D0 955 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 EFCC1Q9HA90 598 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 MAN1A1P33908 653 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 NCBP1Q09161 790 aaKnown RBP9.71□□□□□ -0.86
GABRE-209ENST00000486255 RAD51AP2Q09MP3 1159 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 PPP2R5DQ14738 602 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 ZGPATQ8N5A5 531 aaKnown RBP9.71□□□□□ -0.86
GABRE-209ENST00000486255 CCDC89Q8N998 374 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 TRIM6Q9C030 488 aaPredicted RBP9.71□□□□□ -0.86
GABRE-209ENST00000486255 ALKQ9UM73 1620 aa9.71□□□□□ -0.86
GABRE-209ENST00000486255 TMTC1Q8IUR5 882 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 RHPN1Q8TCX5 695 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 ATP2A3Q93084 1043 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 LRGUKQ96M69 825 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 DBF4Q9UBU7 674 aaPredicted RBP9.7□□□□□ -0.86
GABRE-209ENST00000486255 FRMPD1Q5SYB0 1578 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 TRAF5O00463 557 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 GABPAQ06546 454 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 CNNM4Q6P4Q7 775 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 SDCCAG3Q96C92 435 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 STX8Q9UNK0 236 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 QRICH2Q9H0J4 1663 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 EXOC5O00471 708 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 NBPF6Q5VWK0 638 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 FAM71BQ8TC56 605 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 NBPF4Q96M43 638 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 ATP1A2P50993 1020 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 MAIP1Q8WWC4 291 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 INTS4Q96HW7 963 aaKnown RBP9.7□□□□□ -0.86
GABRE-209ENST00000486255 TFCP2L1Q9NZI6 479 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 RRP15Q9Y3B9 282 aaKnown RBP9.7□□□□□ -0.86
GABRE-209ENST00000486255 FLT4P35916 1363 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 CYP7A1P22680 504 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 PDE1AP54750 535 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 PDE4DQ08499 809 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 LONRF2Q1L5Z9 754 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 RNF34Q969K3 372 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 ZNF408Q9H9D4 720 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 POLKQ9UBT6 870 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 IQGAP1P46940 1657 aa9.7□□□□□ -0.86
GABRE-209ENST00000486255 REREQ9P2R6 1566 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 RPS6KA2Q15349 733 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 RPS6KA1Q15418 735 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 BEND3Q5T5X7 828 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 CASC4Q6P4E1 433 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 EFCAB13Q8IY85 973 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.69□□□□□ -0.86
GABRE-209ENST00000486255 CCDC117Q8IWD4 279 aaPredicted RBP9.69□□□□□ -0.86
GABRE-209ENST00000486255 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 DLC1Q96QB1 1528 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 PTCD1O75127 700 aaKnown RBP9.69□□□□□ -0.86
GABRE-209ENST00000486255 ATICP31939 592 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 PHBP35232 272 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 POLE2P56282 527 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 PAK1Q13153 545 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 SLC9C1Q4G0N8 1177 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
GABRE-209ENST00000486255 USTQ9Y2C2 406 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 CFAP65Q6ZU64 1925 aaKnown RBP9.69□□□□□ -0.86
GABRE-209ENST00000486255 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 PSMB7Q99436 277 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 ZBTB21Q9ULJ3 1066 aa9.69□□□□□ -0.86
GABRE-209ENST00000486255 ZBTB12Q9Y330 459 aaPredicted RBP9.69□□□□□ -0.86
GABRE-209ENST00000486255 VWA3AA6NCI4 1184 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms