RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ANKRD13CQ8N6S4 541 aa14.93□□□□□ -0.02
PTCD1-205ENST00000485746 ACER1Q8TDN7 264 aa14.93□□□□□ -0.02
PTCD1-205ENST00000485746 DIAPH3Q9NSV4 1193 aa14.93□□□□□ -0.02
PTCD1-205ENST00000485746 EMILIN3Q9NT22 766 aa14.93□□□□□ -0.02
PTCD1-205ENST00000485746 PTPN22Q9Y2R2 807 aa14.93□□□□□ -0.02
PTCD1-205ENST00000485746 MYH1P12882 1939 aa14.93□□□□□ -0.02
PTCD1-205ENST00000485746 SMIM22K7EJ46 135 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 GUCY1A2P33402 732 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 GCLCP48506 637 aaPredicted RBP14.92□□□□□ -0.02
PTCD1-205ENST00000485746 MFAP1P55081 439 aaKnown RBP14.92□□□□□ -0.02
PTCD1-205ENST00000485746 FCGRTP55899 365 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 ICA1Q05084 483 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 NMIQ13287 307 aaPredicted RBP14.92□□□□□ -0.02
PTCD1-205ENST00000485746 TICAM2Q86XR7 235 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 FAM227BQ96M60 508 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 KIAA1683Q9H0B3 1180 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 SH2D4AQ9H788 454 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 EPB41L4AQ9HCS5 686 aaPredicted RBP14.92□□□□□ -0.02
PTCD1-205ENST00000485746 FOCADQ5VW36 1801 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
PTCD1-205ENST00000485746 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L15C9J2P7 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L13C9JLJ4 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L11C9JVI0 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L18D6R9N7 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L22D6RA61 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L17D6RBQ6 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L19D6RCP7 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L20D6RJB6 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 HIP1O00291 1037 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 RAD21O60216 631 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 GNRH1P01148 92 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 NEFLP07196 543 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 BCRP11274 1271 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 SDSP20132 328 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 HOXA7P31268 230 aaPredicted RBP14.91□□□□□ -0.02
PTCD1-205ENST00000485746 PDE4BQ07343 736 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 USP17L24Q0WX57 530 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 CCAR1Q8IX12 1150 aaKnown RBP14.91□□□□□ -0.02
PTCD1-205ENST00000485746 P2RX7Q99572 595 aaKnown RBP14.91□□□□□ -0.02
PTCD1-205ENST00000485746 CDK5RAP2Q96SN8 1893 aa14.91□□□□□ -0.02
PTCD1-205ENST00000485746 SIPA1L1O43166 1804 aa14.9□□□□□ -0.02
PTCD1-205ENST00000485746 A0A0D9SFI3 127 aa14.9□□□□□ -0.02
PTCD1-205ENST00000485746 PDE4AP27815 886 aa14.9□□□□□ -0.02
PTCD1-205ENST00000485746 PPARAQ07869 468 aa14.9□□□□□ -0.02
PTCD1-205ENST00000485746 KANSL2Q9H9L4 492 aa14.9□□□□□ -0.02
PTCD1-205ENST00000485746 CWC22Q9HCG8 908 aaKnown RBP14.9□□□□□ -0.02
PTCD1-205ENST00000485746 TNPO2O14787 897 aaKnown RBP14.89□□□□□ -0.03
PTCD1-205ENST00000485746 PRDM1O75626 825 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 PRMT2P55345 433 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 HERVK_113P62684 666 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 FAM110CQ1W6H9 321 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 SLC9C1Q4G0N8 1177 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 CWC27Q6UX04 472 aaKnown RBP14.89□□□□□ -0.03
PTCD1-205ENST00000485746 NBPF11Q86T75 865 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 RAET1EQ8TD07 263 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 GTF3C2Q8WUA4 911 aaPredicted RBP14.89□□□□□ -0.03
PTCD1-205ENST00000485746 COA7Q96BR5 231 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 TRIM47Q96LD4 638 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 C12orf42Q96LP6 360 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 PAGR1Q9BTK6 254 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 RPAP3Q9H6T3 665 aaPredicted RBP14.89□□□□□ -0.03
PTCD1-205ENST00000485746 TOMM22Q9NS69 142 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 PTCH2Q9Y6C5 1203 aa14.89□□□□□ -0.03
PTCD1-205ENST00000485746 LAMB1P07942 1786 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 TSPY3P0CV98 308 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 TSPY8P0CW00 308 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 EEF2P13639 858 aaKnown RBP14.88□□□□□ -0.03
PTCD1-205ENST00000485746 VCAM1P19320 739 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 RASA1P20936 1047 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 CAP1Q01518 475 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 TTC22Q5TAA0 569 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 VPS53Q5VIR6 699 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
PTCD1-205ENST00000485746 CATSPERGQ6ZRH7 1159 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 CLEC10AQ8IUN9 316 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 GPRC5AQ8NFJ5 357 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 TANGO6Q9C0B7 1094 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 GOPCQ9HD26 462 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 BIN2Q9UBW5 565 aaPredicted RBP14.88□□□□□ -0.03
PTCD1-205ENST00000485746 SRRDQ9UH36 339 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 CCDC171Q6TFL3 1326 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 MYPNQ86TC9 1320 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 MYH7P12883 1935 aa14.88□□□□□ -0.03
PTCD1-205ENST00000485746 A0A1W2PRG0 241 aa14.87□□□□□ -0.03
PTCD1-205ENST00000485746 SOX10P56693 466 aa14.87□□□□□ -0.03
PTCD1-205ENST00000485746 CTDSPL2Q05D32 466 aa14.87□□□□□ -0.03
PTCD1-205ENST00000485746 ALX1Q15699 326 aa14.87□□□□□ -0.03
PTCD1-205ENST00000485746 ZNF589Q86UQ0 364 aaPredicted RBP14.87□□□□□ -0.03
PTCD1-205ENST00000485746 SPICE1Q8N0Z3 855 aa14.87□□□□□ -0.03
PTCD1-205ENST00000485746 TMX2Q9Y320 296 aa14.87□□□□□ -0.03
PTCD1-205ENST00000485746 ATAD5Q96QE3 1844 aa14.87□□□□□ -0.03
PTCD1-205ENST00000485746 HSPD1P10809 573 aaKnown RBP14.86□□□□□ -0.03
PTCD1-205ENST00000485746 CTGFP29279 349 aa14.86□□□□□ -0.03
PTCD1-205ENST00000485746 TFAP4Q01664 338 aa14.86□□□□□ -0.03
PTCD1-205ENST00000485746 FAM47AQ5JRC9 791 aa14.86□□□□□ -0.03
PTCD1-205ENST00000485746 LPAR1Q92633 364 aa14.86□□□□□ -0.03
PTCD1-205ENST00000485746 VCPKMTQ9H867 229 aa14.86□□□□□ -0.03
PTCD1-205ENST00000485746 CLIP2Q9UDT6 1046 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms