RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 IL15P40933 162 aaPredicted RBP15.04■□□□□ -0
SSR4-210ENST00000485612 TLE2Q04725 743 aa15.04■□□□□ -0
SSR4-210ENST00000485612 CCDC85BQ15834 202 aaPredicted RBP15.04■□□□□ -0
SSR4-210ENST00000485612 C1orf53Q5VUE5 145 aa15.04■□□□□ -0
SSR4-210ENST00000485612 ANO1Q5XXA6 986 aa15.04■□□□□ -0
SSR4-210ENST00000485612 CCDC102BQ68D86 513 aa15.04■□□□□ -0
SSR4-210ENST00000485612 NPLOC4Q8TAT6 608 aa15.04■□□□□ -0
SSR4-210ENST00000485612 FERMT2Q96AC1 680 aa15.04■□□□□ -0
SSR4-210ENST00000485612 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
SSR4-210ENST00000485612 COPRSQ9NQ92 184 aa15.04■□□□□ -0
SSR4-210ENST00000485612 RABGAP1Q9Y3P9 1069 aa15.04■□□□□ -0
SSR4-210ENST00000485612 MYH1P12882 1939 aa15.04■□□□□ -0
SSR4-210ENST00000485612 CNMDO75829 334 aa15.03■□□□□ -0
SSR4-210ENST00000485612 CYBAP13498 195 aa15.03■□□□□ -0
SSR4-210ENST00000485612 TIMM10P62072 90 aa15.03■□□□□ -0
SSR4-210ENST00000485612 RASGRF1Q13972 1273 aa15.03■□□□□ -0
SSR4-210ENST00000485612 NECAB3Q96P71 396 aaPredicted RBP15.03■□□□□ -0
SSR4-210ENST00000485612 PRDM12Q9H4Q4 367 aa15.03■□□□□ -0
SSR4-210ENST00000485612 IVNS1ABPQ9Y6Y0 642 aa15.03■□□□□ -0
SSR4-210ENST00000485612 RLFQ13129 1914 aa15.03■□□□□ -0
SSR4-210ENST00000485612 MAP4K4O95819 1239 aaPredicted RBP15.02■□□□□ -0
SSR4-210ENST00000485612 CLTBP09497 229 aa15.02■□□□□ -0
SSR4-210ENST00000485612 RAG1P15918 1043 aa15.02■□□□□ -0
SSR4-210ENST00000485612 RARSP54136 660 aaKnown RBP15.02■□□□□ -0
SSR4-210ENST00000485612 JAG1P78504 1218 aa15.02■□□□□ -0
SSR4-210ENST00000485612 MECOMQ03112 1051 aa15.02■□□□□ -0
SSR4-210ENST00000485612 FPGSQ05932 587 aa15.02■□□□□ -0
SSR4-210ENST00000485612 ERICH6Q7L0X2 663 aa15.02■□□□□ -0
SSR4-210ENST00000485612 EMILIN3Q9NT22 766 aa15.02■□□□□ -0
SSR4-210ENST00000485612 PI4KBQ9UBF8 816 aa15.02■□□□□ -0
SSR4-210ENST00000485612 A0A1B0GUL7 405 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 KIAA0355O15063 1070 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 ZBTB22O15209 634 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 IGHA2P01877 340 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 CT47B1P0C2W7 299 aaPredicted RBP15.01□□□□□ -0.01
SSR4-210ENST00000485612 TFCP2Q12800 502 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 GRB14Q14449 540 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 USP17L2Q6R6M4 530 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 ZNF384Q8TF68 577 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 LRFN3Q9BTN0 628 aa15.01□□□□□ -0.01
SSR4-210ENST00000485612 SEPT4O43236 478 aa15□□□□□ -0.01
SSR4-210ENST00000485612 LDHCP07864 332 aa15□□□□□ -0.01
SSR4-210ENST00000485612 IGFBP4P22692 258 aa15□□□□□ -0.01
SSR4-210ENST00000485612 LRRC41Q15345 812 aa15□□□□□ -0.01
SSR4-210ENST00000485612 PI16Q6UXB8 463 aa15□□□□□ -0.01
SSR4-210ENST00000485612 CCDC129Q6ZRS4 1044 aa15□□□□□ -0.01
SSR4-210ENST00000485612 DPP9Q86TI2 863 aa15□□□□□ -0.01
SSR4-210ENST00000485612 XAGE2Q96GT9 111 aa15□□□□□ -0.01
SSR4-210ENST00000485612 TMEM39AQ9NV64 488 aa15□□□□□ -0.01
SSR4-210ENST00000485612 PDS5AQ29RF7 1337 aaKnown RBP14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L15C9J2P7 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L13C9JLJ4 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L11C9JVI0 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L18D6R9N7 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L22D6RA61 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L17D6RBQ6 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L19D6RCP7 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L20D6RJB6 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 SRGAP3O43295 1099 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 BMP1P13497 986 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 PBX2P40425 430 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 USP17L24Q0WX57 530 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 ADGRE1Q14246 886 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 SHROOM1Q2M3G4 852 aaPredicted RBP14.99□□□□□ -0.01
SSR4-210ENST00000485612 OLFML2BQ68BL8 750 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 PBX4Q9BYU1 374 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
SSR4-210ENST00000485612 GINM1Q9NU53 330 aa14.99□□□□□ -0.01
SSR4-210ENST00000485612 GDF11O95390 407 aa14.98□□□□□ -0.01
SSR4-210ENST00000485612 GSTO1P78417 241 aa14.98□□□□□ -0.01
SSR4-210ENST00000485612 PRAMEF19Q5SWL8 479 aa14.98□□□□□ -0.01
SSR4-210ENST00000485612 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
SSR4-210ENST00000485612 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
SSR4-210ENST00000485612 EPHX3Q9H6B9 360 aa14.98□□□□□ -0.01
SSR4-210ENST00000485612 PHF24Q9UPV7 400 aa14.98□□□□□ -0.01
SSR4-210ENST00000485612 GRXCR1A8MXD5 290 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 PQBP1O60828 265 aaKnown RBP14.97□□□□□ -0.01
SSR4-210ENST00000485612 MTX1Q13505 466 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 CATSPERGQ6ZRH7 1159 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 TBC1D9Q6ZT07 1266 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 FOXP4Q8IVH2 680 aaPredicted RBP14.97□□□□□ -0.01
SSR4-210ENST00000485612 NEUROD6Q96NK8 337 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.97□□□□□ -0.012e-8■□□□□ 8.3
SSR4-210ENST00000485612 TRIM34Q9BYJ4 488 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 CXXC1Q9P0U4 656 aaPredicted RBP14.97□□□□□ -0.01
SSR4-210ENST00000485612 HMG20BQ9P0W2 317 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 BTBD7Q9P203 1132 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 ZBTB21Q9ULJ3 1066 aa14.97□□□□□ -0.01
SSR4-210ENST00000485612 PNMA6EA0A0J9YXQ4 647 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 BCAR3O75815 825 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 GNAI3P08754 354 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 TRIM27P14373 513 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 FAM47AQ5JRC9 791 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 TMEM31Q5JXX7 168 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 ALYREFQ86V81 257 aaKnown RBP14.96□□□□□ -0.01
SSR4-210ENST00000485612 CRACR2BQ8N4Y2 399 aaPredicted RBP14.96□□□□□ -0.01
SSR4-210ENST00000485612 SLC44A5Q8NCS7 719 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 ARHGAP45Q92619 1136 aa14.96□□□□□ -0.01
SSR4-210ENST00000485612 NSUN4Q96CB9 384 aaKnown RBP14.96□□□□□ -0.01
SSR4-210ENST00000485612 DNAJC18Q9H819 358 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms