RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ERICH2A1L162 156 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 UNCXA6NJT0 531 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 NOVP48745 357 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 SEC23AQ15436 765 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 TMEM67Q5HYA8 995 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 PPP4R3BQ5MIZ7 849 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 Q6ZUG5 572 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 TTC14Q96N46 770 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 ALDH8A1Q9H2A2 487 aaPredicted RBP20.67■□□□□ 0.9
CHMP3-207ENST00000485465 PICK1Q9NRD5 415 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.67■□□□□ 0.9
CHMP3-207ENST00000485465 SNCAIPQ9Y6H5 919 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 TNKSO95271 1327 aa20.67■□□□□ 0.9
CHMP3-207ENST00000485465 SH2B2O14492 632 aaPredicted RBP20.66■□□□□ 0.9
CHMP3-207ENST00000485465 RCSD1Q6JBY9 416 aa20.66■□□□□ 0.9
CHMP3-207ENST00000485465 DGKHQ86XP1 1220 aa20.66■□□□□ 0.9
CHMP3-207ENST00000485465 FBXL16Q8N461 479 aa20.66■□□□□ 0.9
CHMP3-207ENST00000485465 ENAHQ8N8S7 591 aaPredicted RBP20.66■□□□□ 0.9
CHMP3-207ENST00000485465 IL27Q8NEV9 243 aa20.66■□□□□ 0.9
CHMP3-207ENST00000485465 ANKS1AQ92625 1134 aa20.66■□□□□ 0.9
CHMP3-207ENST00000485465 GPHNQ9NQX3 736 aaPredicted RBP20.66■□□□□ 0.9
CHMP3-207ENST00000485465 GREB1LQ9C091 1923 aaPredicted RBP20.66■□□□□ 0.9
CHMP3-207ENST00000485465 TRPM7Q96QT4 1865 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 USP17L5A8MUK1 530 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 TTLL1O95922 423 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 PTPRAP18433 802 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 FGD1P98174 961 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 ICA1Q05084 483 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 WTAPQ15007 396 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 CLEC10AQ8IUN9 316 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 SIAH1Q8IUQ4 282 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 CLMNQ96JQ2 1002 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 AGXT2Q9BYV1 514 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 LY9Q9HBG7 655 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 NYAP2Q9P242 653 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
CHMP3-207ENST00000485465 EEF2P13639 858 aaKnown RBP20.64■□□□□ 0.89
CHMP3-207ENST00000485465 LIFRP42702 1097 aa20.64■□□□□ 0.89
CHMP3-207ENST00000485465 IFIT1BQ5T764 474 aaKnown RBP20.64■□□□□ 0.89
CHMP3-207ENST00000485465 CCDC84Q86UT8 332 aaPredicted RBP20.64■□□□□ 0.89
CHMP3-207ENST00000485465 TMTC2Q8N394 836 aa20.64■□□□□ 0.89
CHMP3-207ENST00000485465 ELP3Q9H9T3 547 aa20.64■□□□□ 0.89
CHMP3-207ENST00000485465 SENP2Q9HC62 589 aa20.64■□□□□ 0.89
CHMP3-207ENST00000485465 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.89
CHMP3-207ENST00000485465 DOCK1Q14185 1865 aa20.64■□□□□ 0.89
CHMP3-207ENST00000485465 ST18O60284 1047 aa20.63■□□□□ 0.89
CHMP3-207ENST00000485465 AK2P54819 239 aa20.63■□□□□ 0.89
CHMP3-207ENST00000485465 ATP2B2Q01814 1243 aa20.63■□□□□ 0.89
CHMP3-207ENST00000485465 TOB2Q14106 344 aaPredicted RBP20.63■□□□□ 0.89
CHMP3-207ENST00000485465 MKL1Q969V6 931 aa20.63■□□□□ 0.89
CHMP3-207ENST00000485465 TMEM47Q9BQJ4 181 aa20.63■□□□□ 0.89
CHMP3-207ENST00000485465 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.63■□□□□ 0.89
CHMP3-207ENST00000485465 OTOFQ9HC10 1997 aa20.63■□□□□ 0.89
CHMP3-207ENST00000485465 ATAD5Q96QE3 1844 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 TOP1P11387 765 aaKnown RBP20.62■□□□□ 0.89
CHMP3-207ENST00000485465 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 SGMS1Q86VZ5 419 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 BRF1Q92994 677 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 SLC10A4Q96EP9 437 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 WDR18Q9BV38 432 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 AS3MTQ9HBK9 375 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 ARHGEF10LQ9HCE6 1279 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 ZHX2Q9Y6X8 837 aa20.62■□□□□ 0.89
CHMP3-207ENST00000485465 TMEM88BA6NKF7 163 aa20.61■□□□□ 0.89
CHMP3-207ENST00000485465 HUNKP57058 714 aa20.61■□□□□ 0.89
CHMP3-207ENST00000485465 NFXL1Q6ZNB6 911 aa20.61■□□□□ 0.89
CHMP3-207ENST00000485465 ERO1BQ86YB8 467 aa20.61■□□□□ 0.89
CHMP3-207ENST00000485465 ACER1Q8TDN7 264 aa20.61■□□□□ 0.89
CHMP3-207ENST00000485465 KAT14Q9H8E8 782 aa20.61■□□□□ 0.89
CHMP3-207ENST00000485465 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
CHMP3-207ENST00000485465 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 SPDYE5A6NIY4 337 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 ECE1P42892 770 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 PPATQ06203 517 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 APOBRQ0VD83 1088 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 SAPCD2Q86UD0 394 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 ZNF280CQ8ND82 737 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 CNKSR2Q8WXI2 1034 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 TMX2Q9Y320 296 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 AFG3L2Q9Y4W6 797 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 TLL2Q9Y6L7 1015 aa20.6■□□□□ 0.89
CHMP3-207ENST00000485465 EVCP57679 992 aa20.59■□□□□ 0.89
CHMP3-207ENST00000485465 LRRC47Q8N1G4 583 aaKnown RBP20.59■□□□□ 0.89
CHMP3-207ENST00000485465 OPTNQ96CV9 577 aa20.59■□□□□ 0.89
CHMP3-207ENST00000485465 LARP6Q9BRS8 491 aaKnown RBP20.59■□□□□ 0.89
CHMP3-207ENST00000485465 SH2D4AQ9H788 454 aa20.59■□□□□ 0.89
CHMP3-207ENST00000485465 BRPF3Q9ULD4 1205 aa20.59■□□□□ 0.89
CHMP3-207ENST00000485465 KLF18A0A0U1RQI7 1052 aa20.58■□□□□ 0.89
CHMP3-207ENST00000485465 CD2BP2O95400 341 aaKnown RBP20.58■□□□□ 0.89
CHMP3-207ENST00000485465 SPP2Q13103 211 aa20.58■□□□□ 0.89
CHMP3-207ENST00000485465 PPIL2Q13356 520 aa20.58■□□□□ 0.89
CHMP3-207ENST00000485465 CATIPQ7Z7H3 387 aa20.58■□□□□ 0.89
CHMP3-207ENST00000485465 PNMA1Q8ND90 353 aa20.58■□□□□ 0.89
CHMP3-207ENST00000485465 OTUD5Q96G74 571 aa20.58■□□□□ 0.89
CHMP3-207ENST00000485465 SLC12A7Q9Y666 1083 aa20.58■□□□□ 0.89
CHMP3-207ENST00000485465 USP17L10C9JJH3 530 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 MCM2P49736 904 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms