RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 FCGRTP55899 365 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 U2AF1Q01081 240 aaKnown RBP eCLIP7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 FAM160A1Q05DH4 1040 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 TRIP4Q15650 581 aaPredicted RBP7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 SLC27A3Q5K4L6 730 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 BICDL1Q6ZP65 573 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 LRP10Q7Z4F1 713 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 HOMER1Q86YM7 354 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 NPAS3Q8IXF0 933 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 RPUSD2Q8IZ73 545 aaKnown RBP7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 MEIOBQ8N635 442 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 C1orf127Q8N9H9 656 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 ABHD8Q96I13 439 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 DCAF5Q96JK2 942 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 HSH2DQ96JZ2 352 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 AGBL1Q96MI9 1066 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 DNAJC7Q99615 494 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 NT5C1AQ9BXI3 368 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 ANKIB1Q9P2G1 1089 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 AKAP2Q9Y2D5 859 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 ERVV-2B6SEH9 535 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 NEFMP07197 916 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 HMOX1P09601 288 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 VEGFBP49765 207 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 RELBQ01201 579 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 IFRD2Q12894 506 aaPredicted RBP7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 TAF7LQ5H9L4 462 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 AKAP4Q5JQC9 854 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 C1orf141Q5JVX7 400 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 SNAP47Q5SQN1 464 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 IER5Q5VY09 327 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 FBXL19Q6PCT2 694 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 PMEPA1Q969W9 287 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 SRRTQ9BXP5 876 aaKnown RBP7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 IRF2BPLQ9H1B7 796 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 TMX1Q9H3N1 280 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 ZNF395Q9H8N7 513 aaPredicted RBP7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 NMRK2Q9NPI5 230 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 RIPOR2Q9Y4F9 1068 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 KCNMB2Q9Y691 235 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 NHSQ6T4R5 1651 aa7.12□□□□□ -1.27
NHLRC3-205ENST00000485407 ESYT3A0FGR9 886 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 SOBPA7XYQ1 873 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 H3BM21 787 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 TPD52L2O43399 206 aaKnown RBP7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 HTATSF1O43719 755 aaKnown RBP7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 FBXO24O75426 580 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 INPP5BP32019 993 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 GYS2P54840 703 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 INSM1Q01101 510 aaPredicted RBP7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 APOBRQ0VD83 1088 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 TNNI3KQ59H18 835 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 C6orf118Q5T5N4 469 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 PCNX4Q63HM2 1172 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 ZNF530Q6P9A1 599 aaPredicted RBP7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 C16orf71Q8IYS4 520 aaPredicted RBP7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 LINC00528Q8N1L1 170 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 C3orf58Q8NDZ4 430 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 CHRDQ9H2X0 955 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 MYH16Q9H6N6 1097 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 UBP1Q9NZI7 540 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 CNTN3Q9P232 1028 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 PAPPAQ13219 1627 aa7.11□□□□□ -1.27
NHLRC3-205ENST00000485407 LOC102724159A0A0B4J2E5 919 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 CES1P23141 567 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 PRKAR2BP31323 418 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 AMPD3Q01432 767 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 PWP2Q15269 919 aaKnown RBP7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 ZNF827Q17R98 1081 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 MTHFSDQ2M296 383 aaKnown RBP7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 C4orf17Q53FE4 359 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 ARSHQ5FYA8 562 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 DTHD1Q6ZMT9 781 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 CCDC81Q6ZN84 652 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 BTLAQ7Z6A9 289 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 LILRB2Q8N423 598 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 TRPM4Q8TD43 1214 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 C7orf43Q8WVR3 580 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 SMARCC1Q92922 1105 aaPredicted RBP7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 NKD1Q969G9 470 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 OXCT2Q9BYC2 517 aaPredicted RBP7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 CCDC113Q9H0I3 377 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 ST7Q9NRC1 585 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 ABI2Q9NYB9 513 aaPredicted RBP7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 ITGB4P16144 1822 aa7.1□□□□□ -1.27
NHLRC3-205ENST00000485407 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 BTAF1O14981 1849 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 A0A1W2PP55 124 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 GNAT3A8MTJ3 354 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 FOXN1O15353 648 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 XYLBO75191 536 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 UPP2O95045 317 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 MAP4K4O95819 1239 aaPredicted RBP7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 PF4P02776 101 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 BMP2P12643 396 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 EPB42P16452 691 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms