RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 CWC27Q6UX04 472 aaKnown RBP19.38■□□□□ 0.69
DDR1-246ENST00000485023 ERO1AQ96HE7 468 aa19.38■□□□□ 0.69
DDR1-246ENST00000485023 ADGRA2Q96PE1 1338 aa19.38■□□□□ 0.69
DDR1-246ENST00000485023 TRIM17Q9Y577 477 aa19.38■□□□□ 0.69
DDR1-246ENST00000485023 MYH8P13535 1937 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 ROBO3Q96MS0 1386 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 PRDM1O75626 825 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 TMEM179Q6ZVK1 233 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 ABHD8Q96I13 439 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 ARHGAP39Q9C0H5 1083 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 MKNK2Q9HBH9 465 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 EMILIN3Q9NT22 766 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 ZSWIM8A7E2V4 1837 aa19.37■□□□□ 0.69
DDR1-246ENST00000485023 CCDC171Q6TFL3 1326 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 C19orf81C9J6K1 198 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 CENPBP07199 599 aaPredicted RBP19.36■□□□□ 0.69
DDR1-246ENST00000485023 ATP2B2Q01814 1243 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 PPARAQ07869 468 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 USP17L2Q6R6M4 530 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 C17orf99Q6UX52 265 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
DDR1-246ENST00000485023 PNMA3Q9UL41 463 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 SLC45A1Q9Y2W3 748 aa19.36■□□□□ 0.69
DDR1-246ENST00000485023 RASA1P20936 1047 aa19.35■□□□□ 0.69
DDR1-246ENST00000485023 OSBPP22059 807 aa19.35■□□□□ 0.69
DDR1-246ENST00000485023 ICA1Q05084 483 aa19.35■□□□□ 0.69
DDR1-246ENST00000485023 PABPC4Q13310 644 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDR1-246ENST00000485023 OTOP1Q7RTM1 612 aa19.35■□□□□ 0.69
DDR1-246ENST00000485023 CCDC136Q96JN2 1154 aa19.35■□□□□ 0.69
DDR1-246ENST00000485023 CCDC17Q96LX7 622 aa19.35■□□□□ 0.69
DDR1-246ENST00000485023 ASCC2Q9H1I8 757 aaPredicted RBP19.35■□□□□ 0.69
DDR1-246ENST00000485023 A0A1W2PRG0 241 aa19.34■□□□□ 0.69
DDR1-246ENST00000485023 IRX3P78415 501 aaPredicted RBP19.34■□□□□ 0.69
DDR1-246ENST00000485023 LACTBP83111 547 aaPredicted RBP19.34■□□□□ 0.69
DDR1-246ENST00000485023 CTDSPL2Q05D32 466 aa19.34■□□□□ 0.69
DDR1-246ENST00000485023 KIAA1683Q9H0B3 1180 aa19.34■□□□□ 0.69
DDR1-246ENST00000485023 EFCC1Q9HA90 598 aa19.34■□□□□ 0.69
DDR1-246ENST00000485023 TAOK2Q9UL54 1235 aa19.34■□□□□ 0.69
DDR1-246ENST00000485023 BCRP11274 1271 aa19.33■□□□□ 0.68
DDR1-246ENST00000485023 USP14P54578 494 aa19.33■□□□□ 0.68
DDR1-246ENST00000485023 KIF22Q14807 665 aa19.33■□□□□ 0.68
DDR1-246ENST00000485023 TICAM2Q86XR7 235 aa19.33■□□□□ 0.68
DDR1-246ENST00000485023 ANKRD13CQ8N6S4 541 aa19.33■□□□□ 0.68
DDR1-246ENST00000485023 HIP1O00291 1037 aa19.32■□□□□ 0.68
DDR1-246ENST00000485023 PEX10O60683 326 aa19.32■□□□□ 0.68
DDR1-246ENST00000485023 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
DDR1-246ENST00000485023 HSPD1P10809 573 aaKnown RBP19.32■□□□□ 0.68
DDR1-246ENST00000485023 VCAM1P19320 739 aa19.32■□□□□ 0.68
DDR1-246ENST00000485023 CTGFP29279 349 aa19.32■□□□□ 0.68
DDR1-246ENST00000485023 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.32■□□□□ 0.68
DDR1-246ENST00000485023 ARHGEF10LQ9HCE6 1279 aa19.32■□□□□ 0.68
DDR1-246ENST00000485023 INCENPQ9NQS7 918 aa19.32■□□□□ 0.68
DDR1-246ENST00000485023 CCDC85CA6NKD9 419 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 RAD21O60216 631 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 EEF2P13639 858 aaKnown RBP19.31■□□□□ 0.68
DDR1-246ENST00000485023 HAND2P61296 217 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 PDE4BQ07343 736 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 FAM47AQ5JRC9 791 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 SIAH1Q8IUQ4 282 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 ZNF444Q8N0Y2 327 aaPredicted RBP19.31■□□□□ 0.68
DDR1-246ENST00000485023 SPICE1Q8N0Z3 855 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 C12orf42Q96LP6 360 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 P2RX7Q99572 595 aaKnown RBP19.31■□□□□ 0.68
DDR1-246ENST00000485023 IL25Q9H293 177 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 ZNF287Q9HBT7 754 aa19.31■□□□□ 0.68
DDR1-246ENST00000485023 FMNL1O95466 1100 aaPredicted RBP19.3■□□□□ 0.68
DDR1-246ENST00000485023 FGAP02671 866 aa19.3■□□□□ 0.68
DDR1-246ENST00000485023 PSMC4P43686 418 aa19.3■□□□□ 0.68
DDR1-246ENST00000485023 MFAP1P55081 439 aaKnown RBP19.3■□□□□ 0.68
DDR1-246ENST00000485023 KIAA1755Q5JYT7 1200 aa19.3■□□□□ 0.68
DDR1-246ENST00000485023 FBXO46Q6PJ61 603 aaPredicted RBP19.3■□□□□ 0.68
DDR1-246ENST00000485023 TRIM47Q96LD4 638 aa19.3■□□□□ 0.68
DDR1-246ENST00000485023 RPAP3Q9H6T3 665 aaPredicted RBP19.3■□□□□ 0.68
DDR1-246ENST00000485023 TOMM22Q9NS69 142 aa19.3■□□□□ 0.68
DDR1-246ENST00000485023 HPS5Q9UPZ3 1129 aa19.3■□□□□ 0.68
DDR1-246ENST00000485023 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
DDR1-246ENST00000485023 HERVK_113P62684 666 aa19.29■□□□□ 0.68
DDR1-246ENST00000485023 PKN2Q16513 984 aaKnown RBP19.29■□□□□ 0.68
DDR1-246ENST00000485023 PAGR1Q9BTK6 254 aa19.29■□□□□ 0.68
DDR1-246ENST00000485023 TANGO6Q9C0B7 1094 aa19.29■□□□□ 0.68
DDR1-246ENST00000485023 SH2D4AQ9H788 454 aa19.29■□□□□ 0.68
DDR1-246ENST00000485023 KANSL2Q9H9L4 492 aa19.29■□□□□ 0.68
DDR1-246ENST00000485023 TACC3Q9Y6A5 838 aa19.29■□□□□ 0.68
DDR1-246ENST00000485023 USP17L15C9J2P7 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L13C9JLJ4 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L11C9JVI0 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L18D6R9N7 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L22D6RA61 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L17D6RBQ6 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L19D6RCP7 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L20D6RJB6 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 TSPY3P0CV98 308 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 TSPY8P0CW00 308 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 GCLCP48506 637 aaPredicted RBP19.28■□□□□ 0.68
DDR1-246ENST00000485023 USP17L24Q0WX57 530 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 ARHGEF6Q15052 776 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 ALX1Q15699 326 aa19.28■□□□□ 0.68
DDR1-246ENST00000485023 RRP12Q5JTH9 1297 aaKnown RBP19.28■□□□□ 0.68
DDR1-246ENST00000485023 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
DDR1-246ENST00000485023 PTPN22Q9Y2R2 807 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms