RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 SRRDQ9UH36 339 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 FCGRTP55899 365 aa15.48■□□□□ 0.07
HDAC1-209ENST00000484305 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-209ENST00000484305 IRX3P78415 501 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-209ENST00000484305 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-209ENST00000484305 LRRFIP1Q32MZ4 808 aaKnown RBP15.48■□□□□ 0.07
HDAC1-209ENST00000484305 SLC9C1Q4G0N8 1177 aa15.48■□□□□ 0.07
HDAC1-209ENST00000484305 C16orf86Q6ZW13 317 aa15.48■□□□□ 0.07
HDAC1-209ENST00000484305 P2RX7Q99572 595 aaKnown RBP15.48■□□□□ 0.07
HDAC1-209ENST00000484305 FEZ1Q99689 392 aa15.48■□□□□ 0.07
HDAC1-209ENST00000484305 TAOK2Q9UL54 1235 aa15.48■□□□□ 0.07
HDAC1-209ENST00000484305 PEX10O60683 326 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 AKR1B1P15121 316 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 HOXD10P28358 340 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-209ENST00000484305 PRMT2P55345 433 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 FAM110CQ1W6H9 321 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 ZMYM1Q5SVZ6 1142 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 GIMAP6Q6P9H5 292 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 ZNF333Q96JL9 665 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 C12orf42Q96LP6 360 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 KIAA1683Q9H0B3 1180 aa15.47■□□□□ 0.07
HDAC1-209ENST00000484305 EPB41L4AQ9HCS5 686 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-209ENST00000484305 ARPP21Q9UBL0 812 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-209ENST00000484305 KIAA0100Q14667 2235 aaKnown RBP15.47■□□□□ 0.07
HDAC1-209ENST00000484305 MYPNQ86TC9 1320 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 A0A1W2PRG0 241 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 NUCB1Q02818 461 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 PRKCZQ05513 592 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 SBK1Q52WX2 424 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 TMEM179Q6ZVK1 233 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 NBPF11Q86T75 865 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 CHD1LQ86WJ1 897 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 CLEC10AQ8IUN9 316 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 SH3TC2Q8TF17 1288 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 EVI5LQ96CN4 794 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 GABRQQ9UN88 632 aa15.46■□□□□ 0.07
HDAC1-209ENST00000484305 RBBP6Q7Z6E9 1792 aaKnown RBP15.46■□□□□ 0.07
HDAC1-209ENST00000484305 POTEFA5A3E0 1075 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 PATL2C9JE40 543 aaKnown RBP15.45■□□□□ 0.06
HDAC1-209ENST00000484305 TNPO2O14787 897 aaKnown RBP15.45■□□□□ 0.06
HDAC1-209ENST00000484305 APPP05067 770 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 GNAT2P19087 354 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 VCAM1P19320 739 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 USP14P54578 494 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 HERVK_113P62684 666 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 POTEEQ6S8J3 1075 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 SIAH1Q8IUQ4 282 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 STK11IPQ8N1F8 1099 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 RAET1EQ8TD07 263 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 CCDC17Q96LX7 622 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 TXNRD2Q9NNW7 524 aa15.45■□□□□ 0.06
HDAC1-209ENST00000484305 MINDY4BA8MYZ0 360 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 MYCP01106 439 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-209ENST00000484305 TDO2P48775 406 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 CATSPERGQ6ZRH7 1159 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 CCDC129Q6ZRS4 1044 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 PLEKHM2Q8IWE5 1019 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 IFNL3Q8IZI9 196 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 RBPJLQ9UBG7 517 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 MORF4L1Q9UBU8 362 aa15.44■□□□□ 0.06
HDAC1-209ENST00000484305 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L15C9J2P7 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L13C9JLJ4 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L11C9JVI0 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L18D6R9N7 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L22D6RA61 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L17D6RBQ6 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L19D6RCP7 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L20D6RJB6 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 GRK4P32298 578 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 FLT3LGP49771 235 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 USP17L24Q0WX57 530 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 KIAA1755Q5JYT7 1200 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 ROBO3Q96MS0 1386 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 PLXNB2O15031 1838 aa15.43■□□□□ 0.06
HDAC1-209ENST00000484305 RASA1P20936 1047 aa15.42■□□□□ 0.06
HDAC1-209ENST00000484305 ICA1Q05084 483 aa15.42■□□□□ 0.06
HDAC1-209ENST00000484305 Q3C1V9 767 aa15.42■□□□□ 0.06
HDAC1-209ENST00000484305 GPRC5AQ8NFJ5 357 aa15.42■□□□□ 0.06
HDAC1-209ENST00000484305 COA7Q96BR5 231 aa15.42■□□□□ 0.06
HDAC1-209ENST00000484305 PAGR1Q9BTK6 254 aa15.42■□□□□ 0.06
HDAC1-209ENST00000484305 RPAP3Q9H6T3 665 aaPredicted RBP15.42■□□□□ 0.06
HDAC1-209ENST00000484305 RLFQ13129 1914 aa15.42■□□□□ 0.06
HDAC1-209ENST00000484305 TNRC18O15417 2968 aaPredicted RBP15.42■□□□□ 0.06
HDAC1-209ENST00000484305 BRCA2P51587 3418 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 FOXP2O15409 715 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 ADCY3O60266 1144 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 EEF2P13639 858 aaKnown RBP15.41■□□□□ 0.06
HDAC1-209ENST00000484305 ERVK-9P63128 1117 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 ERVK-24P63145 666 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 FAM227BQ96M60 508 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC1-209ENST00000484305 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 NACAP1Q9BZK3 213 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 OSBPL3Q9H4L5 887 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 KANSL2Q9H9L4 492 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 MKNK2Q9HBH9 465 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms