RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RALGPS1Q5JS13 557 aa8.23□□□□□ -1.09
SCAF11-207ENST00000484275 CILP2Q8IUL8 1156 aa8.23□□□□□ -1.09
SCAF11-207ENST00000484275 ALPK1Q96QP1 1244 aa8.23□□□□□ -1.09
SCAF11-207ENST00000484275 DUSP15Q9H1R2 295 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-207ENST00000484275 SLAMF8Q9P0V8 285 aa8.23□□□□□ -1.09
SCAF11-207ENST00000484275 CEP131Q9UPN4 1083 aa8.23□□□□□ -1.09
SCAF11-207ENST00000484275 RLBP1P12271 317 aa8.22□□□□□ -1.09
SCAF11-207ENST00000484275 PIWIL2Q8TC59 973 aaKnown RBP8.22□□□□□ -1.09
SCAF11-207ENST00000484275 CILPO75339 1184 aa8.21□□□□□ -1.1
SCAF11-207ENST00000484275 ETV3P41162 512 aa8.21□□□□□ -1.1
SCAF11-207ENST00000484275 ERVFC1P60507 584 aa8.21□□□□□ -1.1
SCAF11-207ENST00000484275 CAMK2GQ13555 558 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-207ENST00000484275 PKN1Q16512 942 aa8.21□□□□□ -1.1
SCAF11-207ENST00000484275 TMEM67Q5HYA8 995 aa8.21□□□□□ -1.1
SCAF11-207ENST00000484275 LCE4AQ5TA78 99 aa8.21□□□□□ -1.1
SCAF11-207ENST00000484275 CCDC84Q86UT8 332 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-207ENST00000484275 SLC38A3Q99624 504 aa8.21□□□□□ -1.1
SCAF11-207ENST00000484275 F13A1P00488 732 aa8.2□□□□□ -1.1
SCAF11-207ENST00000484275 PF4P02776 101 aa8.2□□□□□ -1.1
SCAF11-207ENST00000484275 PLCG1P19174 1290 aa8.2□□□□□ -1.1
SCAF11-207ENST00000484275 XPCQ01831 940 aaPredicted RBP8.2□□□□□ -1.1
SCAF11-207ENST00000484275 GAB4Q2WGN9 574 aa8.2□□□□□ -1.1
SCAF11-207ENST00000484275 SPOCD1Q6ZMY3 1216 aa8.2□□□□□ -1.1
SCAF11-207ENST00000484275 TTC6Q86TZ1 520 aa8.2□□□□□ -1.1
SCAF11-207ENST00000484275 RHOVQ96L33 236 aa8.2□□□□□ -1.1
SCAF11-207ENST00000484275 KRT1P04264 644 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 SRFP11831 508 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 LMNB2Q03252 620 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 TMEM201Q5SNT2 666 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 MPZL3Q6UWV2 235 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 CREG2Q8IUH2 290 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 BHLHE22Q8NFJ8 381 aaPredicted RBP8.19□□□□□ -1.1
SCAF11-207ENST00000484275 CYB5D2Q8WUJ1 264 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 GATAD2BQ8WXI9 593 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 KCNK12Q9HB15 430 aa8.19□□□□□ -1.1
SCAF11-207ENST00000484275 LRRN2O75325 713 aa8.18□□□□□ -1.1
SCAF11-207ENST00000484275 TPP2P29144 1249 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-207ENST00000484275 TMPRSS7Q7RTY8 843 aa8.18□□□□□ -1.1
SCAF11-207ENST00000484275 DTWD2Q8NBA8 298 aa8.18□□□□□ -1.1
SCAF11-207ENST00000484275 CRELD1Q96HD1 420 aa8.18□□□□□ -1.1
SCAF11-207ENST00000484275 ADAMTS10Q9H324 1103 aa8.18□□□□□ -1.1
SCAF11-207ENST00000484275 POLR3KQ9Y2Y1 108 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-207ENST00000484275 DNAJA2O60884 412 aa8.17□□□□□ -1.1
SCAF11-207ENST00000484275 HK2P52789 917 aa8.17□□□□□ -1.1
SCAF11-207ENST00000484275 KRTAP4-7Q9BYR0 210 aa8.17□□□□□ -1.1
SCAF11-207ENST00000484275 SP110Q9HB58 689 aa8.17□□□□□ -1.1
SCAF11-207ENST00000484275 TMEM59LQ9UK28 342 aa8.17□□□□□ -1.1
SCAF11-207ENST00000484275 PRR36Q9H6K5 1346 aa8.17□□□□□ -1.1
SCAF11-207ENST00000484275 SORBS3O60504 671 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 FAM160A1Q05DH4 1040 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 SYDE1Q6ZW31 735 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-207ENST00000484275 ABHD4Q8TB40 342 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 CCDC120Q96HB5 630 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 TMEM74Q96NL1 305 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 DIRC2Q96SL1 478 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 REV1Q9UBZ9 1251 aa8.16□□□□□ -1.1
SCAF11-207ENST00000484275 CHURC1-FNTBB4DL54 471 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 GRIN3BO60391 1043 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 TSPAN15O95858 294 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 BPNT1O95861 308 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 HPXP02790 462 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 GBP2P32456 591 aaPredicted RBP8.15□□□□□ -1.1
SCAF11-207ENST00000484275 TRHRP34981 398 aaPredicted RBP8.15□□□□□ -1.1
SCAF11-207ENST00000484275 SLFN12Q8IYM2 578 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 FBXO27Q8NI29 283 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 RSRP1Q9BUV0 290 aa8.15□□□□□ -1.1
SCAF11-207ENST00000484275 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
SCAF11-207ENST00000484275 PDIA4P13667 645 aaKnown RBP8.14□□□□□ -1.11
SCAF11-207ENST00000484275 GARTP22102 1010 aa8.14□□□□□ -1.11
SCAF11-207ENST00000484275 RAP1GAPP47736 663 aa8.14□□□□□ -1.11
SCAF11-207ENST00000484275 YARSP54577 528 aaKnown RBP8.14□□□□□ -1.11
SCAF11-207ENST00000484275 FBLN7Q53RD9 439 aa8.14□□□□□ -1.11
SCAF11-207ENST00000484275 TSPYL5Q86VY4 417 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-207ENST00000484275 C1QL4Q86Z23 238 aa8.14□□□□□ -1.11
SCAF11-207ENST00000484275 BAHD1Q8TBE0 780 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-207ENST00000484275 RNF141Q8WVD5 230 aa8.14□□□□□ -1.11
SCAF11-207ENST00000484275 TRIT1Q9H3H1 467 aaKnown RBP8.14□□□□□ -1.11
SCAF11-207ENST00000484275 DUSP13Q9UII6 198 aa8.14□□□□□ -1.11
SCAF11-207ENST00000484275 MINDY4BA8MYZ0 360 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 HTR3BO95264 441 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 C1QTNF9P0C862 333 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 CFPP27918 469 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 MYLIPQ8WY64 445 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 GPATCH2Q9NW75 528 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 VTI1BQ9UEU0 232 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 KLHL3Q9UH77 587 aa8.13□□□□□ -1.11
SCAF11-207ENST00000484275 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 RAC2P15153 192 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 EGR3Q06889 387 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 RELL1Q8IUW5 271 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 GOLM1Q8NBJ4 401 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 KREMEN1Q96MU8 473 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
SCAF11-207ENST00000484275 TIGD5Q53EQ6 642 aa8.11□□□□□ -1.11
SCAF11-207ENST00000484275 REC114Q7Z4M0 266 aa8.11□□□□□ -1.11
SCAF11-207ENST00000484275 FBXO15Q8NCQ5 510 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms