RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 FCGRTP55899 365 aa6.05□□□□□ -1.44
PTCD3-214ENST00000483925 CHMP4BP1P59074 171 aa6.05□□□□□ -1.44
PTCD3-214ENST00000483925 PDZD3Q86UT5 571 aa6.05□□□□□ -1.44
PTCD3-214ENST00000483925 FAM168AQ92567 244 aa6.05□□□□□ -1.44
PTCD3-214ENST00000483925 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
PTCD3-214ENST00000483925 DDX56Q9NY93 547 aaKnown RBP6.05□□□□□ -1.44
PTCD3-214ENST00000483925 FAM8A1Q9UBU6 413 aa6.05□□□□□ -1.44
PTCD3-214ENST00000483925 STRIP2Q9ULQ0 834 aa6.05□□□□□ -1.44
PTCD3-214ENST00000483925 MAP4K4O95819 1239 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-214ENST00000483925 CEACAM5P06731 702 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 CD96P40200 585 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTCD3-214ENST00000483925 ARSHQ5FYA8 562 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 ERMP1Q7Z2K6 904 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTCD3-214ENST00000483925 TMEM40Q8WWA1 233 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 SRCIN1Q9C0H9 1055 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 ZNF408Q9H9D4 720 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 TYW1Q9NV66 732 aaKnown RBP6.04□□□□□ -1.44
PTCD3-214ENST00000483925 ADAMTS6Q9UKP5 1117 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 R3HCC1Q9Y3T6 440 aaKnown RBP6.04□□□□□ -1.44
PTCD3-214ENST00000483925 U3KQE9 123 aa6.04□□□□□ -1.44
PTCD3-214ENST00000483925 CDC45O75419 566 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 EIF3JO75822 258 aaKnown RBP6.03□□□□□ -1.44
PTCD3-214ENST00000483925 NEFMP07197 916 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 ARNTP27540 789 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 ERVK-24P63145 666 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 ZC3H12AQ5D1E8 599 aaKnown RBP6.03□□□□□ -1.44
PTCD3-214ENST00000483925 ANGEL2Q5VTE6 544 aaKnown RBP6.03□□□□□ -1.44
PTCD3-214ENST00000483925 ANKS3Q6ZW76 656 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 TICAM2Q86XR7 235 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 SULF2Q8IWU5 870 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 SMC5Q8IY18 1101 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 TOP6BLQ8N6T0 577 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 RNF214Q8ND24 703 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 LRRN4CLQ8ND94 238 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 UBE2Q2Q8WVN8 375 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 ISL2Q96A47 359 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 SPON2Q9BUD6 331 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 GEMIN8Q9NWZ8 242 aaKnown RBP6.03□□□□□ -1.44
PTCD3-214ENST00000483925 PLAGL2Q9UPG8 496 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 SNX11Q9Y5W9 270 aa6.03□□□□□ -1.44
PTCD3-214ENST00000483925 DBX1A6NMT0 343 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 PEX14O75381 377 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 PWP1Q13610 501 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 COL9A2Q14055 689 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-214ENST00000483925 RAB33AQ14088 237 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 ZNF124Q15973 351 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 PKN1Q16512 942 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 MAP1SQ66K74 1059 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-214ENST00000483925 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 KIAA0825Q8IV33 1275 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 RPUSD2Q8IZ73 545 aaKnown RBP6.02□□□□□ -1.45
PTCD3-214ENST00000483925 STK35Q8TDR2 534 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 APPBP2Q92624 585 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 DEPDC7Q96QD5 511 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 EMILIN2Q9BXX0 1053 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 BCO2Q9BYV7 579 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 AKAP2Q9Y2D5 859 aa6.02□□□□□ -1.45
PTCD3-214ENST00000483925 NME2P22392 152 aa6.01□□□□□ -1.45
PTCD3-214ENST00000483925 NASPP49321 788 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-214ENST00000483925 MEI1Q5TIA1 1274 aa6.01□□□□□ -1.45
PTCD3-214ENST00000483925 KSR1Q8IVT5 923 aa6.01□□□□□ -1.45
PTCD3-214ENST00000483925 PRPF38AQ8NAV1 312 aaKnown RBP6.01□□□□□ -1.45
PTCD3-214ENST00000483925 RSRP1Q9BUV0 290 aa6.01□□□□□ -1.45
PTCD3-214ENST00000483925 NOC4LQ9BVI4 516 aaKnown RBP6.01□□□□□ -1.45
PTCD3-214ENST00000483925 OSBPL7Q9BZF2 842 aa6.01□□□□□ -1.45
PTCD3-214ENST00000483925 TNKS2Q9H2K2 1166 aa6.01□□□□□ -1.45
PTCD3-214ENST00000483925 SNTG2Q9NY99 539 aa6.01□□□□□ -1.45
PTCD3-214ENST00000483925 G3BP2Q9UN86 482 aaKnown RBP6.01□□□□□ -1.45
PTCD3-214ENST00000483925 KLF4O43474 513 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 PDGFRBP09619 1106 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 ITIH2P19823 946 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 AMPD3Q01432 767 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 PI16Q6UXB8 463 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 HOMER1Q86YM7 354 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 RELL1Q8IUW5 271 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 GPBAR1Q8TDU6 330 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 ASB11Q8WXH4 323 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 ACSBG1Q96GR2 724 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 HEXIM2Q96MH2 286 aaKnown RBP6□□□□□ -1.45
PTCD3-214ENST00000483925 CEP89Q96ST8 783 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 SLC38A3Q99624 504 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 PRDM16Q9HAZ2 1276 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 FANCLQ9NW38 375 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 GTF2IRD1Q9UHL9 959 aa6□□□□□ -1.45
PTCD3-214ENST00000483925 HMGB1P1B2RPK0 211 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-214ENST00000483925 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTCD3-214ENST00000483925 USP17L7P0C7H9 530 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 ETFBP38117 255 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 ZNF252P-AS1Q0IIN9 211 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 TMED8Q6PL24 325 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-214ENST00000483925 NXPE4Q6UWF7 544 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 FAM214BQ7L5A3 538 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 FLAD1Q8NFF5 587 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 SH3TC2Q8TF17 1288 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 CPLX3Q8WVH0 158 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 CBX8Q9HC52 389 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 COPRSQ9NQ92 184 aa5.99□□□□□ -1.45
PTCD3-214ENST00000483925 KBTBD4Q9NVX7 518 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms