RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 PALD1Q9ULE6 856 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 SNX14Q9Y5W7 946 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 TAF6LQ9Y6J9 622 aa5.44□□□□□ -1.54
HDAC9-224ENST00000483142 CYP2D7A0A087X1C5 515 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 PHF20L1A8MW92 1017 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 TCP10L2B9ZVM9 353 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 SMIM22K7EJ46 135 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 ITGBL1O95965 494 aaPredicted RBP5.43□□□□□ -1.54
HDAC9-224ENST00000483142 PLCD1P51178 756 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 RCAN1P53805 252 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 ANTXR2P58335 489 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 FSTL1Q12841 308 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 PICALMQ13492 652 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 AMHR2Q16671 573 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 KRT26Q7Z3Y9 468 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 FOXP4Q8IVH2 680 aaPredicted RBP5.43□□□□□ -1.54
HDAC9-224ENST00000483142 ZFPM1Q8IX07 1006 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 ZNF784Q8NCA9 323 aaPredicted RBP5.43□□□□□ -1.54
HDAC9-224ENST00000483142 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 NEDD1Q8NHV4 660 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 CCDC102AQ96A19 550 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 DCPSQ96C86 337 aaKnown RBP5.43□□□□□ -1.54
HDAC9-224ENST00000483142 CCDC17Q96LX7 622 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 ZNF341Q9BYN7 854 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 GLIS2Q9BZE0 524 aaPredicted RBP5.43□□□□□ -1.54
HDAC9-224ENST00000483142 ZNF287Q9HBT7 754 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 TCP11L1Q9NUJ3 509 aa5.43□□□□□ -1.54
HDAC9-224ENST00000483142 RLFQ13129 1914 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 RBBP6Q7Z6E9 1792 aaKnown RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SPDYE5A6NIY4 337 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 E7EWF7 191 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ZNF213O14771 459 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 TOMM70O94826 608 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 POLR3DP05423 398 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SLC3A2P08195 630 aaKnown RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 HMGB1P09429 215 aaKnown RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ZKSCAN1P17029 563 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 YY1P25490 414 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 GUCY1A2P33402 732 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 CDK8P49336 464 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 EVCP57679 992 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 HAND2P61296 217 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 PDE4BQ07343 736 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SEC23AQ15436 765 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ADCK5Q3MIX3 580 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SUPT20HL1Q3ZLR7 823 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 PPP4R3BQ5MIZ7 849 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 LDLRAD1Q5T700 205 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 NBPF12Q5TAG4 269 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 TMEM179Q6ZVK1 233 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SGMS1Q86VZ5 419 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SCYL3Q8IZE3 742 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SLC44A5Q8NCS7 719 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ANKS1AQ92625 1134 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 KLRG1Q96E93 195 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 HHIPL1Q96JK4 782 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 TTC14Q96N46 770 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 TBC1D2Q9BYX2 928 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 C22orf23Q9BZE7 217 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 KRT23Q9C075 422 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ALDH8A1Q9H2A2 487 aaPredicted RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 UPF2Q9HAU5 1272 aaKnown RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 RRAGCQ9HB90 399 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ZSWIM6Q9HCJ5 1215 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SAP30BPQ9UHR5 308 aaKnown RBP5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ZBTB21Q9ULJ3 1066 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 SNCAIPQ9Y6H5 919 aa5.42□□□□□ -1.54
HDAC9-224ENST00000483142 ZNF236Q9UL36 1845 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 POTEB2H3BUK9 544 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 SH2B2O14492 632 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 CTNND1O60716 968 aaKnown RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 APPP05067 770 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 ASNSP08243 561 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 AKR1B1P15121 316 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 RPS6KB1P23443 525 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 NF2P35240 595 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 CAP2P40123 477 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 LIFRP42702 1097 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 EXOSC10Q01780 885 aaKnown RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 CTDSPL2Q05D32 466 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 TCP10Q12799 353 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 COL9A3Q14050 684 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 HIC1Q14526 733 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 RRP1BQ14684 758 aaKnown RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 RABEP1Q15276 862 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 EAPPQ56P03 285 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 CCDC178Q5BJE1 867 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 MAP1SQ66K74 1059 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 RCSD1Q6JBY9 416 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 MFSD6Q6ZSS7 791 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 PARP9Q8IXQ6 854 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 KRI1Q8N9T8 703 aaKnown RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 NKX2-3Q8TAU0 364 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 SP7Q8TDD2 431 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-224ENST00000483142 ESR2Q92731 530 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 DYNLL2Q96FJ2 89 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 TMEM87BQ96K49 555 aa5.41□□□□□ -1.54
HDAC9-224ENST00000483142 C12orf42Q96LP6 360 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms