RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 MPHOSPH8Q99549 860 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 KRT23Q9C075 422 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 CNNM2Q9H8M5 875 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 TOMM22Q9NS69 142 aa17.06■□□□□ 0.32
ATG4B-220ENST00000482507 PTPREP23469 700 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 TDO2P48775 406 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 ERCC6LQ2NKX8 1250 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 ADGRA1Q86SQ6 560 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 REXO1L1PQ8IX06 675 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 CRACR2BQ8N4Y2 399 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-220ENST00000482507 GTPBP4Q9BZE4 634 aaKnown RBP17.05■□□□□ 0.32
ATG4B-220ENST00000482507 SERTAD1Q9UHV2 236 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 POLR2DO15514 142 aaKnown RBP17.05■□□□□ 0.32
ATG4B-220ENST00000482507 WTAPQ15007 396 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 ZNF446Q9NWS9 450 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 COL4A1P02462 1669 aa17.05■□□□□ 0.32
ATG4B-220ENST00000482507 CBFA2T2O43439 604 aa17.04■□□□□ 0.32
ATG4B-220ENST00000482507 FAM205CA6NFA0 338 aa17.04■□□□□ 0.32
ATG4B-220ENST00000482507 ETF1P62495 437 aaKnown RBP17.04■□□□□ 0.32
ATG4B-220ENST00000482507 POSTNQ15063 836 aa17.04■□□□□ 0.32
ATG4B-220ENST00000482507 TRMT44Q8IYL2 757 aaKnown RBP17.04■□□□□ 0.32
ATG4B-220ENST00000482507 FOXP1Q9H334 677 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-220ENST00000482507 IQSEC3Q9UPP2 1182 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-220ENST00000482507 ATP2B1P20020 1258 aa17.03■□□□□ 0.32
ATG4B-220ENST00000482507 SARSP49591 514 aaKnown RBP17.03■□□□□ 0.32
ATG4B-220ENST00000482507 ST5P78524 1137 aa17.03■□□□□ 0.32
ATG4B-220ENST00000482507 WASF1Q92558 559 aa17.03■□□□□ 0.32
ATG4B-220ENST00000482507 FAM53CQ9NYF3 392 aa17.03■□□□□ 0.32
ATG4B-220ENST00000482507 DNAI1Q9UI46 699 aa17.03■□□□□ 0.32
ATG4B-220ENST00000482507 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■■□□□ 12.3
ATG4B-220ENST00000482507 PARP3Q9Y6F1 533 aa17.03■□□□□ 0.32
ATG4B-220ENST00000482507 TOP1P11387 765 aaKnown RBP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 ZNF18P17022 549 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 IGHMBP2P38935 993 aaKnown RBP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 TBX2Q13207 712 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 ILDR2Q71H61 639 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 ZNF654Q8IZM8 581 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 PDILTQ8N807 584 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 FANCBQ8NB91 859 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 ACTN4O43707 911 aaKnown RBP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 MORC3Q14149 939 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 R3HDM1Q15032 1099 aaKnown RBP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
ATG4B-220ENST00000482507 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 SDR42E1Q8WUS8 393 aa17.02■□□□□ 0.32
ATG4B-220ENST00000482507 DEXIO95424 95 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 RILPL1Q5EBL4 403 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 EARS2Q5JPH6 523 aaKnown RBP17.01■□□□□ 0.31
ATG4B-220ENST00000482507 ANKRD18AQ8IVF6 992 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 NFE2L3Q9Y4A8 694 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 NRDCO43847 1150 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 H2AFXP16104 143 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-220ENST00000482507 RPS8P62241 208 aaKnown RBP17.01■□□□□ 0.31
ATG4B-220ENST00000482507 PPARAQ07869 468 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 CSRNP2Q9H175 543 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 CABP5Q9NP86 173 aa17.01■□□□□ 0.31
ATG4B-220ENST00000482507 A0A087X0B3 334 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 VWA3AA6NCI4 1184 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 WNT7AO00755 349 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 GNAT2P19087 354 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 SEC23AQ15436 765 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
ATG4B-220ENST00000482507 SRPRBQ9Y5M8 271 aaKnown RBP17■□□□□ 0.31
ATG4B-220ENST00000482507 PHLPP2Q6ZVD8 1323 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 hCG_1642624A0A1W2PR95 340 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 MYO1BO43795 1136 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 SART3Q15020 963 aaKnown RBP17■□□□□ 0.31
ATG4B-220ENST00000482507 TC2NQ8N9U0 490 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
ATG4B-220ENST00000482507 LRP2BPQ9P2M1 347 aa17■□□□□ 0.31
ATG4B-220ENST00000482507 TAF1P21675 1872 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 CHRNDQ07001 517 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 PKN1Q16512 942 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 ZNF579Q8NAF0 562 aaKnown RBP16.99■□□□□ 0.31
ATG4B-220ENST00000482507 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-220ENST00000482507 PPP2R2CQ9Y2T4 447 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 TNKSO95271 1327 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 CYP7A1P22680 504 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 ADKP55263 362 aaKnown RBP16.99■□□□□ 0.31
ATG4B-220ENST00000482507 SPATA20Q8TB22 786 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 ENOX1Q8TC92 643 aaKnown RBP16.99■□□□□ 0.31
ATG4B-220ENST00000482507 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
ATG4B-220ENST00000482507 SMARCE1Q969G3 411 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 RGPD3A6NKT7 1758 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-220ENST00000482507 RGPD4Q7Z3J3 1758 aa16.99■□□□□ 0.31
ATG4B-220ENST00000482507 CYP2D7A0A087X1C5 515 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 ERICH2A1L162 156 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 PRDM1O75626 825 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 CASP1P29466 404 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 FUT2Q10981 343 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 NOM1Q5C9Z4 860 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms