RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 EPB41L4AQ9HCS5 686 aaPredicted RBP24.03■■□□□ 1.44
CLIP2-205ENST00000482424 MYH8P13535 1937 aa24.03■■□□□ 1.44
CLIP2-205ENST00000482424 PSMC4P43686 418 aa24.02■■□□□ 1.44
CLIP2-205ENST00000482424 RGS19P49795 217 aa24.02■■□□□ 1.44
CLIP2-205ENST00000482424 TMEM179Q6ZVK1 233 aa24.02■■□□□ 1.44
CLIP2-205ENST00000482424 ACER1Q8TDN7 264 aa24.02■■□□□ 1.44
CLIP2-205ENST00000482424 TRIM47Q96LD4 638 aa24.02■■□□□ 1.44
CLIP2-205ENST00000482424 GCLCP48506 637 aaPredicted RBP24.01■■□□□ 1.43
CLIP2-205ENST00000482424 USP14P54578 494 aa24.01■■□□□ 1.43
CLIP2-205ENST00000482424 PRMT2P55345 433 aa24.01■■□□□ 1.43
CLIP2-205ENST00000482424 FAM110CQ1W6H9 321 aa24■■□□□ 1.43
CLIP2-205ENST00000482424 IFNL3Q8IZI9 196 aa24■■□□□ 1.43
CLIP2-205ENST00000482424 ROBO3Q96MS0 1386 aa24■■□□□ 1.43
CLIP2-205ENST00000482424 MGAMO43451 1857 aa24■■□□□ 1.43
CLIP2-205ENST00000482424 MPHOSPH10O00566 681 aaKnown RBP23.99■■□□□ 1.43
CLIP2-205ENST00000482424 AKR1B1P15121 316 aa23.99■■□□□ 1.43
CLIP2-205ENST00000482424 ANKRD13CQ8N6S4 541 aa23.99■■□□□ 1.43
CLIP2-205ENST00000482424 FEZ1Q99689 392 aa23.99■■□□□ 1.43
CLIP2-205ENST00000482424 SRRDQ9UH36 339 aa23.99■■□□□ 1.43
CLIP2-205ENST00000482424 PTCH2Q9Y6C5 1203 aa23.99■■□□□ 1.43
CLIP2-205ENST00000482424 A0A1W2PRG0 241 aa23.98■■□□□ 1.43
CLIP2-205ENST00000482424 FMNL1O95466 1100 aaPredicted RBP23.98■■□□□ 1.43
CLIP2-205ENST00000482424 HOXD10P28358 340 aa23.98■■□□□ 1.43
CLIP2-205ENST00000482424 SIAH1Q8IUQ4 282 aa23.98■■□□□ 1.43
CLIP2-205ENST00000482424 ARMC5Q96C12 935 aa23.98■■□□□ 1.43
CLIP2-205ENST00000482424 P2RX7Q99572 595 aaKnown RBP23.98■■□□□ 1.43
CLIP2-205ENST00000482424 HELLSQ9NRZ9 838 aa23.98■■□□□ 1.43
CLIP2-205ENST00000482424 APPP05067 770 aa23.97■■□□□ 1.43
CLIP2-205ENST00000482424 TDO2P48775 406 aa23.97■■□□□ 1.43
CLIP2-205ENST00000482424 FCGRTP55899 365 aa23.97■■□□□ 1.43
CLIP2-205ENST00000482424 IRX3P78415 501 aaPredicted RBP23.97■■□□□ 1.43
CLIP2-205ENST00000482424 ZYXQ15942 572 aaKnown RBP23.97■■□□□ 1.43
CLIP2-205ENST00000482424 NACAP1Q9BZK3 213 aa23.97■■□□□ 1.43
CLIP2-205ENST00000482424 MORF4L1Q9UBU8 362 aa23.97■■□□□ 1.43
CLIP2-205ENST00000482424 MINDY4BA8MYZ0 360 aa23.96■■□□□ 1.43
CLIP2-205ENST00000482424 FOXP2O15409 715 aa23.96■■□□□ 1.43
CLIP2-205ENST00000482424 HERVK_113P62684 666 aa23.96■■□□□ 1.43
CLIP2-205ENST00000482424 USP17L15C9J2P7 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L13C9JLJ4 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L11C9JVI0 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L18D6R9N7 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L22D6RA61 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L17D6RBQ6 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L19D6RCP7 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L20D6RJB6 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 ECM2O94769 699 aaPredicted RBP23.95■■□□□ 1.42
CLIP2-205ENST00000482424 VCAM1P19320 739 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 USP17L24Q0WX57 530 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 CATSPERGQ6ZRH7 1159 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 CCDC129Q6ZRS4 1044 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 TMX2Q9Y320 296 aa23.95■■□□□ 1.42
CLIP2-205ENST00000482424 GREB1LQ9C091 1923 aaPredicted RBP23.94■■□□□ 1.42
CLIP2-205ENST00000482424 CENPFP49454 3210 aa23.94■■□□□ 1.42
CLIP2-205ENST00000482424 TRIM6-TRIM34B2RNG4 842 aa23.94■■□□□ 1.42
CLIP2-205ENST00000482424 RASA1P20936 1047 aa23.94■■□□□ 1.42
CLIP2-205ENST00000482424 GTF3C2Q8WUA4 911 aaPredicted RBP23.94■■□□□ 1.42
CLIP2-205ENST00000482424 FAM227BQ96M60 508 aa23.94■■□□□ 1.42
CLIP2-205ENST00000482424 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.94■■□□□ 1.42
CLIP2-205ENST00000482424 KANSL2Q9H9L4 492 aa23.94■■□□□ 1.42
CLIP2-205ENST00000482424 PDE4AP27815 886 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 SOX10P56693 466 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 ICA1Q05084 483 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 MCMDC2Q4G0Z9 681 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 POTEEQ6S8J3 1075 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 RILPL2Q969X0 211 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 ZNF333Q96JL9 665 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 NAPBQ9H115 298 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 MKNK2Q9HBH9 465 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 ARHGEF10LQ9HCE6 1279 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 RBPJLQ9UBG7 517 aa23.93■■□□□ 1.42
CLIP2-205ENST00000482424 MYPNQ86TC9 1320 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 A0A0D9SFI3 127 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 SLC9C1Q4G0N8 1177 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 NBPF11Q86T75 865 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 CLEC10AQ8IUN9 316 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 ZNF287Q9HBT7 754 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 TXNRD2Q9NNW7 524 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 GABRQQ9UN88 632 aa23.92■■□□□ 1.42
CLIP2-205ENST00000482424 DOCK3Q8IZD9 2030 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 TNPO2O14787 897 aaKnown RBP23.91■■□□□ 1.42
CLIP2-205ENST00000482424 SDSP20132 328 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 PRKCZQ05513 592 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 ALX1Q15699 326 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 KIAA1755Q5JYT7 1200 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 VPS53Q5VIR6 699 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 LBX2Q6XYB7 198 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 RPAP3Q9H6T3 665 aaPredicted RBP23.91■■□□□ 1.42
CLIP2-205ENST00000482424 SH2D4AQ9H788 454 aa23.91■■□□□ 1.42
CLIP2-205ENST00000482424 EEF2P13639 858 aaKnown RBP23.9■■□□□ 1.42
CLIP2-205ENST00000482424 PPARAQ07869 468 aa23.9■■□□□ 1.42
CLIP2-205ENST00000482424 NMIQ13287 307 aaPredicted RBP23.9■■□□□ 1.42
CLIP2-205ENST00000482424 STK11IPQ8N1F8 1099 aa23.9■■□□□ 1.42
CLIP2-205ENST00000482424 GPRC5AQ8NFJ5 357 aa23.9■■□□□ 1.42
CLIP2-205ENST00000482424 LPAR1Q92633 364 aa23.9■■□□□ 1.42
CLIP2-205ENST00000482424 VCPKMTQ9H867 229 aa23.9■■□□□ 1.42
CLIP2-205ENST00000482424 IRF5Q13568 498 aa23.89■■□□□ 1.41
CLIP2-205ENST00000482424 Q3C1V9 767 aa23.89■■□□□ 1.41
CLIP2-205ENST00000482424 ZNF444Q8N0Y2 327 aaPredicted RBP23.89■■□□□ 1.41
CLIP2-205ENST00000482424 RAET1EQ8TD07 263 aa23.89■■□□□ 1.41
CLIP2-205ENST00000482424 COA7Q96BR5 231 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms