RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 PTPN12Q05209 780 aaKnown RBP12.9□□□□□ -0.35
DDX39B-219ENST00000481456 PDE4DQ08499 809 aa12.9□□□□□ -0.35
DDX39B-219ENST00000481456 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.35
DDX39B-219ENST00000481456 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.35
DDX39B-219ENST00000481456 BCAS4Q8TDM0 211 aa12.9□□□□□ -0.35
DDX39B-219ENST00000481456 PLIN2Q99541 437 aa12.9□□□□□ -0.35
DDX39B-219ENST00000481456 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 TCERG1LQ5VWI1 586 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 STMN4Q9H169 189 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 PUM3Q15397 648 aaKnown RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 STAMQ92783 540 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 FAM89AQ96GI7 184 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 MRFAP1Q9Y605 127 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 ABCA9Q8IUA7 1624 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 GYS2P54840 703 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 RBM43Q6ZSC3 357 aaKnown RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 A0A087WUV0 522 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 LIG3P49916 1009 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 COPB1P53618 953 aaKnown RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 CFAP221Q4G0U5 840 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
DDX39B-219ENST00000481456 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
DDX39B-219ENST00000481456 NRKQ7Z2Y5 1582 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 H7C1D1 291 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 CIAO1O76071 339 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 MAGEA9P43362 315 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 NAPAP54920 295 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 IFIH1Q9BYX4 1025 aaKnown RBP12.88□□□□□ -0.35
DDX39B-219ENST00000481456 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 CAPN7Q9Y6W3 813 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 NUTM2BA6NNL0 878 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-219ENST00000481456 NUTM2EB1AL46 878 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-219ENST00000481456 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 ARID5AQ03989 594 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 UBLCP1Q8WVY7 318 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-219ENST00000481456 CSRNP2Q9H175 543 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-219ENST00000481456 CCT5P48643 541 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
DDX39B-219ENST00000481456 C6orf50Q9HD87 102 aa12.88□□□□□ -0.35
DDX39B-219ENST00000481456 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-219ENST00000481456 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
DDX39B-219ENST00000481456 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 LRRC45Q96CN5 670 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 JRKLQ9Y4A0 524 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 MROH2AA6NES4 1674 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 MAGEA1P43355 309 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 DNM2P50570 870 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 ZNF654Q8IZM8 581 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 ACRBPQ8NEB7 543 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
DDX39B-219ENST00000481456 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 VAT1LQ9HCJ6 419 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 ZCCHC17Q9NP64 241 aaKnown RBP12.87□□□□□ -0.35
DDX39B-219ENST00000481456 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 ZNF76P36508 570 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 A2ML1A8K2U0 1454 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 PPFIA4O75335 1185 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 CCDC172P0C7W6 258 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 SPTY2D1Q68D10 685 aaPredicted RBP12.87□□□□□ -0.35
DDX39B-219ENST00000481456 RUFY4Q6ZNE9 571 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 KCNB2Q92953 911 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 SAMD15Q9P1V8 674 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 STX8Q9UNK0 236 aa12.87□□□□□ -0.35
DDX39B-219ENST00000481456 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 A0A1B0GUA9 196 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 KIF4AO95239 1232 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 PRPHP41219 470 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 L2HGDHQ9H9P8 463 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-219ENST00000481456 MFAP3LO75121 409 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 CCDC26Q8TAB7 109 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 OSBP2Q969R2 916 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 SPATA5Q8NB90 893 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 PSMB7Q99436 277 aa12.86□□□□□ -0.35
DDX39B-219ENST00000481456 TCP1P17987 556 aaKnown RBP12.85□□□□□ -0.35
DDX39B-219ENST00000481456 APBA1Q02410 837 aa12.85□□□□□ -0.35
DDX39B-219ENST00000481456 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms