RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ZNF589Q86UQ0 364 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 PROCA1Q8NCQ7 364 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 P2RX7Q99572 595 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 AS3MTQ9HBK9 375 aa13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 GABRQQ9UN88 632 aa13.69□□□□□ -0.22
RAPGEF1-207ENST00000481260 PRDM1O75626 825 aa13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 ZFYP08048 801 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 OSBPP22059 807 aa13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 IFNL3Q8IZI9 196 aa13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 EVI5LQ96CN4 794 aa13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 SLC45A1Q9Y2W3 748 aa13.68□□□□□ -0.22
RAPGEF1-207ENST00000481260 TRIM6-TRIM34B2RNG4 842 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 APPP05067 770 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 RASA1P20936 1047 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 PKN2Q16513 984 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 SBK1Q52WX2 424 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 USP17L2Q6R6M4 530 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 RILPL2Q969X0 211 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 FEZ1Q99689 392 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 IL25Q9H293 177 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 TMOD4Q9NZQ9 345 aa13.67□□□□□ -0.22
RAPGEF1-207ENST00000481260 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 CNMDO75829 334 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 GSPT1P15170 499 aaKnown RBP13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 VCAM1P19320 739 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 TDO2P48775 406 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 PRKCZQ05513 592 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 KIAA1683Q9H0B3 1180 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 GINM1Q9NU53 330 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 ARPP21Q9UBL0 812 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
RAPGEF1-207ENST00000481260 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 C19orf81C9J6K1 198 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 HOXA7P31268 230 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 HERVK_113P62684 666 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 CTDSPL2Q05D32 466 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 Q3C1V9 767 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 TMEM179Q6ZVK1 233 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 SPICE1Q8N0Z3 855 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 C12orf42Q96LP6 360 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 OSBPL3Q9H4L5 887 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 RPAP3Q9H6T3 665 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 ROBO3Q96MS0 1386 aa13.65□□□□□ -0.22
RAPGEF1-207ENST00000481260 SLC34A2O95436 690 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 EEF2P13639 858 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 SDSP20132 328 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 IRX3P78415 501 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 ATP2B2Q01814 1243 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 ICA1Q05084 483 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 FAM47AQ5JRC9 791 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 SRRDQ9UH36 339 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 MYPNQ86TC9 1320 aa13.64□□□□□ -0.23
RAPGEF1-207ENST00000481260 PPARAQ07869 468 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 KIF22Q14807 665 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 FAM110CQ1W6H9 321 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 CATSPERGQ6ZRH7 1159 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 ARMC5Q96C12 935 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 CHMP4CQ96CF2 233 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 PAGR1Q9BTK6 254 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 PORCNQ9H237 461 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
RAPGEF1-207ENST00000481260 IGKV6D-41A0A0C4DH26 115 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 ELNP15502 786 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 GNAT2P19087 354 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 FCGRTP55899 365 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 MTFR1Q15390 333 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 RASGRP2Q7LDG7 609 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 AMOTL1Q8IY63 956 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 ZNF333Q96JL9 665 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 NAPBQ9H115 298 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 FBXO28Q9NVF7 368 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 MORF4L1Q9UBU8 362 aa13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF1-207ENST00000481260 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
RAPGEF1-207ENST00000481260 TNPO2O14787 897 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms