RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CYBAP13498 195 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 ADCYAP1R1P41586 468 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 RHBDL3P58872 404 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 TLE2Q04725 743 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 MTX1Q13505 466 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 WDR78Q5VTH9 848 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 SNX27Q96L92 541 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 TMOD4Q9NZQ9 345 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 AKAP2Q9Y2D5 859 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 ARIH1Q9Y4X5 557 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 CHD9Q3L8U1 2897 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 PIEZO1Q92508 2521 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 GRXCR1A8MXD5 290 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 GNAI3P08754 354 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 IGFBP4P22692 258 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 BACE1P56817 501 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 JAG1P78504 1218 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 TFF2Q03403 129 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 FPGSQ05932 587 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 PI16Q6UXB8 463 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 NPLOC4Q8TAT6 608 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 PBX4Q9BYU1 374 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 AS3MTQ9HBK9 375 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 HMG20BQ9P0W2 317 aa11.62□□□□□ -0.55
SMARCE1-210ENST00000481231 ATAD5Q96QE3 1844 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 FAM86C2PA6NEL3 165 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 CNMDO75829 334 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 CLTBP09497 229 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 BMP1P13497 986 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 KCNQ1P51787 676 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 TBC1D9Q6ZT07 1266 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 SPATA5Q8NB90 893 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 ARRDC4Q8NCT1 418 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 ARHGAP45Q92619 1136 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 NEUROD6Q96NK8 337 aa11.61□□□□□ -0.55
SMARCE1-210ENST00000481231 MYH2Q9UKX2 1941 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 REV3LO60673 3130 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 RAG1P15918 1043 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 TMEM31Q5JXX7 168 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 GORABQ5T7V8 394 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 MICALL1Q8N3F8 863 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 NSUN4Q96CB9 384 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 WDR18Q9BV38 432 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 TACC3Q9Y6A5 838 aa11.6□□□□□ -0.55
SMARCE1-210ENST00000481231 SLC15A5A6NIM6 579 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 PQBP1O60828 265 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 GNAI2P04899 355 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 TRIM27P14373 513 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 PTPREP23469 700 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 ARID4AP29374 1257 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 GSTO1P78417 241 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 GRB14Q14449 540 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 LRRC41Q15345 812 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 C1orf53Q5VUE5 145 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.59□□□□□ -0.553e-7■■■□□ 15.4
SMARCE1-210ENST00000481231 C11orf16Q9NQ32 467 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 RAI14Q9P0K7 980 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 CXXC1Q9P0U4 656 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 TNNQ9UQP3 1299 aa11.59□□□□□ -0.55
SMARCE1-210ENST00000481231 PNMA6EA0A0J9YXQ4 647 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 GDF11O95390 407 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 IGHA2P01877 340 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 LDHCP07864 332 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 HOXC6P09630 235 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 MCAMP43121 646 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 TEX11Q8IYF3 940 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 GTF3C2Q8WUA4 911 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.567e-7■■■□□ 17.5
SMARCE1-210ENST00000481231 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 TMEM39AQ9NV64 488 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 IVNS1ABPQ9Y6Y0 642 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 CHD7Q9P2D1 2997 aa11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 TCF20Q9UGU0 1960 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-210ENST00000481231 MUC6Q6W4X9 2439 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L10C9JJH3 530 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 IPO8O15397 1037 aaKnown RBP11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 SEPT4O43236 478 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 CCNA1P78396 465 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 G3BP1Q13283 466 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 PRAMEF19Q5SWL8 479 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 DNAJC18Q9H819 358 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 BTBD7Q9P203 1132 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 LRP2BPQ9P2M1 347 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
SMARCE1-210ENST00000481231 C19orf81C9J6K1 198 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 BCAR3O75815 825 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms