RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 GNRH1P01148 92 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 USP14P54578 494 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 SBK1Q52WX2 424 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 TMEM179Q6ZVK1 233 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 PLEKHM2Q8IWE5 1019 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 ANKRD13CQ8N6S4 541 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 EPB41L4AQ9HCS5 686 aaPredicted RBP24.11■■□□□ 1.45
VPS36-204ENST00000480923 AKR1B1P15121 316 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 CTGFP29279 349 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 STK11IPQ8N1F8 1099 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 RILPL2Q969X0 211 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 TRIM47Q96LD4 638 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 CCDC17Q96LX7 622 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 NACAP1Q9BZK3 213 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 KIAA1683Q9H0B3 1180 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 PTCH2Q9Y6C5 1203 aa24.1■■□□□ 1.45
VPS36-204ENST00000480923 BAZ2AQ9UIF9 1905 aaKnown RBP24.1■■□□□ 1.45
VPS36-204ENST00000480923 HOXD10P28358 340 aa24.09■■□□□ 1.45
VPS36-204ENST00000480923 HOXA7P31268 230 aaPredicted RBP24.09■■□□□ 1.45
VPS36-204ENST00000480923 GCLCP48506 637 aaPredicted RBP24.09■■□□□ 1.45
VPS36-204ENST00000480923 FCGRTP55899 365 aa24.09■■□□□ 1.45
VPS36-204ENST00000480923 SOX10P56693 466 aa24.09■■□□□ 1.45
VPS36-204ENST00000480923 CCDC129Q6ZRS4 1044 aa24.09■■□□□ 1.45
VPS36-204ENST00000480923 IFNL3Q8IZI9 196 aa24.08■■□□□ 1.45
VPS36-204ENST00000480923 C12orf42Q96LP6 360 aa24.08■■□□□ 1.45
VPS36-204ENST00000480923 OSBPL3Q9H4L5 887 aa24.08■■□□□ 1.45
VPS36-204ENST00000480923 PRMT2P55345 433 aa24.07■■□□□ 1.44
VPS36-204ENST00000480923 FAM110CQ1W6H9 321 aa24.07■■□□□ 1.44
VPS36-204ENST00000480923 P2RX7Q99572 595 aaKnown RBP24.07■■□□□ 1.44
VPS36-204ENST00000480923 NAPBQ9H115 298 aa24.07■■□□□ 1.44
VPS36-204ENST00000480923 MKNK2Q9HBH9 465 aa24.07■■□□□ 1.44
VPS36-204ENST00000480923 SRRDQ9UH36 339 aa24.07■■□□□ 1.44
VPS36-204ENST00000480923 ZSWIM8A7E2V4 1837 aa24.06■■□□□ 1.44
VPS36-204ENST00000480923 ICA1Q05084 483 aa24.06■■□□□ 1.44
VPS36-204ENST00000480923 CLEC10AQ8IUN9 316 aa24.06■■□□□ 1.44
VPS36-204ENST00000480923 HELLSQ9NRZ9 838 aa24.06■■□□□ 1.44
VPS36-204ENST00000480923 ROBO3Q96MS0 1386 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 A0A1W2PRG0 241 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L15C9J2P7 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L13C9JLJ4 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L11C9JVI0 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L18D6R9N7 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L22D6RA61 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L17D6RBQ6 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L19D6RCP7 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L20D6RJB6 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 VCAM1P19320 739 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 HERVK_113P62684 666 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 USP17L24Q0WX57 530 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 SLC9C1Q4G0N8 1177 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 FAM227BQ96M60 508 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 ARHGEF10LQ9HCE6 1279 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 MYPNQ86TC9 1320 aa24.05■■□□□ 1.44
VPS36-204ENST00000480923 TNPO2O14787 897 aaKnown RBP24.04■■□□□ 1.44
VPS36-204ENST00000480923 TICAM2Q86XR7 235 aa24.04■■□□□ 1.44
VPS36-204ENST00000480923 RAET1EQ8TD07 263 aa24.04■■□□□ 1.44
VPS36-204ENST00000480923 SH2D4AQ9H788 454 aa24.04■■□□□ 1.44
VPS36-204ENST00000480923 A0A0D9SFI3 127 aa24.03■■□□□ 1.44
VPS36-204ENST00000480923 RASA1P20936 1047 aa24.03■■□□□ 1.44
VPS36-204ENST00000480923 ATP2B2Q01814 1243 aa24.03■■□□□ 1.44
VPS36-204ENST00000480923 NMIQ13287 307 aaPredicted RBP24.03■■□□□ 1.44
VPS36-204ENST00000480923 NBPF11Q86T75 865 aa24.03■■□□□ 1.44
VPS36-204ENST00000480923 ARMC5Q96C12 935 aa24.03■■□□□ 1.44
VPS36-204ENST00000480923 ZNF287Q9HBT7 754 aa24.03■■□□□ 1.44
VPS36-204ENST00000480923 PRKCZQ05513 592 aa24.02■■□□□ 1.44
VPS36-204ENST00000480923 MCMDC2Q4G0Z9 681 aa24.02■■□□□ 1.44
VPS36-204ENST00000480923 CATSPERGQ6ZRH7 1159 aa24.02■■□□□ 1.44
VPS36-204ENST00000480923 GTF3C2Q8WUA4 911 aaPredicted RBP24.02■■□□□ 1.44
VPS36-204ENST00000480923 RPAP3Q9H6T3 665 aaPredicted RBP24.02■■□□□ 1.44
VPS36-204ENST00000480923 KANSL2Q9H9L4 492 aa24.02■■□□□ 1.44
VPS36-204ENST00000480923 MORF4L1Q9UBU8 362 aa24.02■■□□□ 1.44
VPS36-204ENST00000480923 PRDM1O75626 825 aa24.01■■□□□ 1.43
VPS36-204ENST00000480923 SLC3A2P08195 630 aaKnown RBP24.01■■□□□ 1.43
VPS36-204ENST00000480923 PDE4AP27815 886 aa24.01■■□□□ 1.43
VPS36-204ENST00000480923 SIAH1Q8IUQ4 282 aa24.01■■□□□ 1.43
VPS36-204ENST00000480923 ZNF444Q8N0Y2 327 aaPredicted RBP24.01■■□□□ 1.43
VPS36-204ENST00000480923 COA7Q96BR5 231 aa24.01■■□□□ 1.43
VPS36-204ENST00000480923 PAGR1Q9BTK6 254 aa24.01■■□□□ 1.43
VPS36-204ENST00000480923 TMX2Q9Y320 296 aa24.01■■□□□ 1.43
VPS36-204ENST00000480923 PEX10O60683 326 aa24■■□□□ 1.43
VPS36-204ENST00000480923 EEF2P13639 858 aaKnown RBP24■■□□□ 1.43
VPS36-204ENST00000480923 SDSP20132 328 aa24■■□□□ 1.43
VPS36-204ENST00000480923 RGS19P49795 217 aa24■■□□□ 1.43
VPS36-204ENST00000480923 PPARAQ07869 468 aa24■■□□□ 1.43
VPS36-204ENST00000480923 VPS53Q5VIR6 699 aa24■■□□□ 1.43
VPS36-204ENST00000480923 GPRC5AQ8NFJ5 357 aa24■■□□□ 1.43
VPS36-204ENST00000480923 SH3TC2Q8TF17 1288 aa24■■□□□ 1.43
VPS36-204ENST00000480923 TXNRD2Q9NNW7 524 aa24■■□□□ 1.43
VPS36-204ENST00000480923 GABRQQ9UN88 632 aa24■■□□□ 1.43
VPS36-204ENST00000480923 FOXP2O15409 715 aa23.99■■□□□ 1.43
VPS36-204ENST00000480923 PDE4BQ07343 736 aa23.99■■□□□ 1.43
VPS36-204ENST00000480923 LPAR1Q92633 364 aa23.99■■□□□ 1.43
VPS36-204ENST00000480923 ZNF333Q96JL9 665 aa23.99■■□□□ 1.43
VPS36-204ENST00000480923 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.99■■□□□ 1.43
VPS36-204ENST00000480923 TANGO6Q9C0B7 1094 aa23.99■■□□□ 1.43
VPS36-204ENST00000480923 VCPKMTQ9H867 229 aa23.99■■□□□ 1.43
VPS36-204ENST00000480923 RBPJLQ9UBG7 517 aa23.99■■□□□ 1.43
VPS36-204ENST00000480923 MYH8P13535 1937 aa23.98■■□□□ 1.43
VPS36-204ENST00000480923 MYCP01106 439 aaPredicted RBP23.98■■□□□ 1.43
VPS36-204ENST00000480923 FLT3LGP49771 235 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms