RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 CEP95Q96GE4 821 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 ZSCAN10Q96SZ4 725 aaPredicted RBP13.18□□□□□ -0.3
CLDN11-205ENST00000480067 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 AS3MTQ9HBK9 375 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 CYP46A1Q9Y6A2 500 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 LAMB1P07942 1786 aa13.18□□□□□ -0.3
CLDN11-205ENST00000480067 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 IFIT3O14879 490 aaKnown RBP13.17□□□□□ -0.3
CLDN11-205ENST00000480067 PRC1O43663 620 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 TTLL1O95922 423 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 FGD1P98174 961 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
CLDN11-205ENST00000480067 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
CLDN11-205ENST00000480067 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 HHIPL1Q96JK4 782 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 TTC14Q96N46 770 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
CLDN11-205ENST00000480067 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
CLDN11-205ENST00000480067 SPP2Q13103 211 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 DEFB115Q30KQ5 88 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 DGKHQ86XP1 1220 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 CLEC10AQ8IUN9 316 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 FEZ1Q99689 392 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 CEP350Q5VT06 3117 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 PLIN4Q96Q06 1357 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 TNKSO95271 1327 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
CLDN11-205ENST00000480067 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 USP17L10C9JJH3 530 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 CPA1P15085 419 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 RPS6KB1P23443 525 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
CLDN11-205ENST00000480067 PPIL2Q13356 520 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 SIAH1Q8IUQ4 282 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
CLDN11-205ENST00000480067 NYAP2Q9P242 653 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 AFG3L2Q9Y4W6 797 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 PCNTO95613 3336 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 WDR19Q8NEZ3 1342 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 CXCL11O14625 94 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 IRF6O14896 467 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 ZBTB48P10074 688 aaPredicted RBP13.15□□□□□ -0.3
CLDN11-205ENST00000480067 ANTXR2P58335 489 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
CLDN11-205ENST00000480067 GRM1Q13255 1194 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 COL9A3Q14050 684 aaPredicted RBP13.15□□□□□ -0.3
CLDN11-205ENST00000480067 WTAPQ15007 396 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
CLDN11-205ENST00000480067 SPRYD7Q5W111 196 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 ENAHQ8N8S7 591 aaPredicted RBP13.15□□□□□ -0.3
CLDN11-205ENST00000480067 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 MKL1Q969V6 931 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 TCEANC2Q96MN5 208 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
CLDN11-205ENST00000480067 A0A1W2PRG0 241 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 RAD21O60216 631 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
CLDN11-205ENST00000480067 HSPA6P17066 643 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 ECE1P42892 770 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 NOVP48745 357 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 NEK4P51957 841 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 BACE1P56817 501 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 MTMR2Q13614 643 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 ANKS1AQ92625 1134 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
CLDN11-205ENST00000480067 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 GJA5P36382 358 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 GTF2A2P52657 109 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 USP14P54578 494 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 HTRA3P83110 453 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 SNAPC2Q13487 334 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 SEC23AQ15436 765 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 ZYXQ15942 572 aaKnown RBP13.13□□□□□ -0.31
CLDN11-205ENST00000480067 CYP4F22Q6NT55 531 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms