RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 AARSD1Q9BTE6 412 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-217ENST00000479511 OSGEPQ9NPF4 335 aa9.92□□□□□ -0.82
GAPVD1-217ENST00000479511 MAGEC2Q9UBF1 373 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-217ENST00000479511 ELOA3CA0A087WX78 387 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 ELOA3DA6NLF2 546 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 C9IYK1 514 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 PPFIA3O75145 1194 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 UBOX5O94941 541 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 EYA4O95677 639 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 GRIA2P42262 883 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 HSP90AA2PQ14568 343 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 ELOA3BQ3SY89 546 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 PPM1JQ5JR12 505 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 EXOC8Q8IYI6 725 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 ZNF513Q8N8E2 541 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 ELOA3Q8NG57 546 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 MRPL4Q9BYD3 311 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 MYH16Q9H6N6 1097 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 SUCOQ9UBS9 1254 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 APEX2Q9UBZ4 518 aa9.91□□□□□ -0.82
GAPVD1-217ENST00000479511 ANKRD34BA5PLL1 514 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 KATNA1O75449 491 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 DNAJC8O75937 253 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 DLGAP3O95886 979 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 CAPNS1P04632 268 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 ITGAVP06756 1048 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 MX2P20592 715 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 GUCY2FP51841 1108 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 ZNF143P52747 638 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 LRRC41Q15345 812 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 BBS9Q3SYG4 887 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 FAM117BQ6P1L5 589 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 LHFPL2Q6ZUX7 228 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 SV2AQ7L0J3 742 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 MCATQ8IVS2 390 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 SCUBE1Q8IWY4 988 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 ZNF775Q96BV0 537 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 TMEM87BQ96K49 555 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 APBA2Q99767 749 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 HAUS7Q99871 368 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 WDR18Q9BV38 432 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 USP26Q9BXU7 913 aa9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 GEMIN8Q9NWZ8 242 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-217ENST00000479511 DNAJC25-GNG10A0A024R161 153 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 LOC100289279A0A1B0GTE1 492 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 RGS13O14921 159 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 TSPAN6O43657 245 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 GAS6Q14393 721 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 ZBTB37Q5TC79 503 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 C20orf204Q6ZNR8 217 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 ZNF227Q86WZ6 799 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 WDR75Q8IWA0 830 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 SLFN12Q8IYM2 578 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 DDX1Q92499 740 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 OSBP2Q969R2 916 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 DHRS1Q96LJ7 313 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 FGD4Q96M96 766 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 ASPSCR1Q9BZE9 553 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 KLHL25Q9H0H3 589 aa9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 JPH1Q9HDC5 661 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-217ENST00000479511 PRODHO43272 600 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 TBX1O43435 398 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 CBFA2T2O43439 604 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 AOC2O75106 756 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 EPHB1P54762 984 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 NLRP12P59046 1061 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 MCL1Q07820 350 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 PHACTR4Q8IZ21 702 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 LEO1Q8WVC0 666 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 IPO9Q96P70 1041 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 FBRSQ9HAH7 460 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 TRIM39Q9HCM9 518 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 LRP2BPQ9P2M1 347 aa9.88□□□□□ -0.83
GAPVD1-217ENST00000479511 DDX3YO15523 660 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 PABPC1P11940 636 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 NTF4P34130 210 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 AFF1P51825 1210 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 YARSP54577 528 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 GORABQ5T7V8 394 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 DDX46Q7L014 1031 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 RIN3Q8TB24 985 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 SLC7A14Q8TBB6 771 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 PPP1R14AQ96A00 147 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 CCDC136Q96JN2 1154 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 LRRC4BQ9NT99 713 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 INTS7Q9NVH2 962 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 GGA1Q9UJY5 639 aa9.87□□□□□ -0.83
GAPVD1-217ENST00000479511 ALBP02768 609 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 C6orf222P0C671 652 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 NAT2P11245 290 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 FGFR1P11362 822 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 ERVK-24P63145 666 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 SUMO1P63165 101 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 PCBP1Q15365 356 aaKnown RBP eCLIP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 DCAF15Q66K64 600 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 HEATR6Q6AI08 1181 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 WWC2Q6AWC2 1192 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 NSMFQ6X4W1 530 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms