RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 ACER1Q8TDN7 264 aa24.79■■□□□ 1.56
PKP4-209ENST00000479398 ARHGAP39Q9C0H5 1083 aa24.79■■□□□ 1.56
PKP4-209ENST00000479398 EPB41L4AQ9HCS5 686 aaPredicted RBP24.79■■□□□ 1.56
PKP4-209ENST00000479398 HELLSQ9NRZ9 838 aa24.79■■□□□ 1.56
PKP4-209ENST00000479398 AKR1B1P15121 316 aa24.78■■□□□ 1.56
PKP4-209ENST00000479398 TDO2P48775 406 aa24.78■■□□□ 1.56
PKP4-209ENST00000479398 NACAP1Q9BZK3 213 aa24.78■■□□□ 1.56
PKP4-209ENST00000479398 KIAA1683Q9H0B3 1180 aa24.78■■□□□ 1.56
PKP4-209ENST00000479398 ASCC2Q9H1I8 757 aaPredicted RBP24.78■■□□□ 1.56
PKP4-209ENST00000479398 GNRH1P01148 92 aa24.77■■□□□ 1.56
PKP4-209ENST00000479398 PSMC4P43686 418 aa24.77■■□□□ 1.56
PKP4-209ENST00000479398 USP14P54578 494 aa24.77■■□□□ 1.56
PKP4-209ENST00000479398 CCDC129Q6ZRS4 1044 aa24.77■■□□□ 1.56
PKP4-209ENST00000479398 C12orf42Q96LP6 360 aa24.77■■□□□ 1.56
PKP4-209ENST00000479398 FEZ1Q99689 392 aa24.77■■□□□ 1.56
PKP4-209ENST00000479398 CTGFP29279 349 aa24.76■■□□□ 1.55
PKP4-209ENST00000479398 GCLCP48506 637 aaPredicted RBP24.76■■□□□ 1.55
PKP4-209ENST00000479398 ZYXQ15942 572 aaKnown RBP24.76■■□□□ 1.55
PKP4-209ENST00000479398 ECM2O94769 699 aaPredicted RBP24.75■■□□□ 1.55
PKP4-209ENST00000479398 PDE4AP27815 886 aa24.75■■□□□ 1.55
PKP4-209ENST00000479398 MCMDC2Q4G0Z9 681 aa24.75■■□□□ 1.55
PKP4-209ENST00000479398 STK11IPQ8N1F8 1099 aa24.75■■□□□ 1.55
PKP4-209ENST00000479398 ANKRD13CQ8N6S4 541 aa24.75■■□□□ 1.55
PKP4-209ENST00000479398 FAM227BQ96M60 508 aa24.75■■□□□ 1.55
PKP4-209ENST00000479398 P2RX7Q99572 595 aaKnown RBP24.75■■□□□ 1.55
PKP4-209ENST00000479398 A0A1W2PRG0 241 aa24.74■■□□□ 1.55
PKP4-209ENST00000479398 FMNL1O95466 1100 aaPredicted RBP24.74■■□□□ 1.55
PKP4-209ENST00000479398 SDSP20132 328 aa24.74■■□□□ 1.55
PKP4-209ENST00000479398 IRX3P78415 501 aaPredicted RBP24.74■■□□□ 1.55
PKP4-209ENST00000479398 SIAH1Q8IUQ4 282 aa24.74■■□□□ 1.55
PKP4-209ENST00000479398 TRIM47Q96LD4 638 aa24.74■■□□□ 1.55
PKP4-209ENST00000479398 NAPBQ9H115 298 aa24.74■■□□□ 1.55
PKP4-209ENST00000479398 MKNK2Q9HBH9 465 aa24.74■■□□□ 1.55
PKP4-209ENST00000479398 HOXD10P28358 340 aa24.73■■□□□ 1.55
PKP4-209ENST00000479398 ZSWIM8A7E2V4 1837 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 A0A0D9SFI3 127 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L15C9J2P7 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L13C9JLJ4 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L11C9JVI0 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L18D6R9N7 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L22D6RA61 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L17D6RBQ6 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L19D6RCP7 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L20D6RJB6 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 FOXP2O15409 715 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 PRMT2P55345 433 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 FCGRTP55899 365 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 USP17L24Q0WX57 530 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 NMIQ13287 307 aaPredicted RBP24.72■■□□□ 1.55
PKP4-209ENST00000479398 KANSL2Q9H9L4 492 aa24.72■■□□□ 1.55
PKP4-209ENST00000479398 ROBO3Q96MS0 1386 aa24.71■■□□□ 1.55
PKP4-209ENST00000479398 RASA1P20936 1047 aa24.71■■□□□ 1.55
PKP4-209ENST00000479398 FAM110CQ1W6H9 321 aa24.71■■□□□ 1.55
PKP4-209ENST00000479398 VPS53Q5VIR6 699 aa24.71■■□□□ 1.55
PKP4-209ENST00000479398 CATSPERGQ6ZRH7 1159 aa24.71■■□□□ 1.55
PKP4-209ENST00000479398 ZNF444Q8N0Y2 327 aaPredicted RBP24.71■■□□□ 1.55
PKP4-209ENST00000479398 ZNF287Q9HBT7 754 aa24.71■■□□□ 1.55
PKP4-209ENST00000479398 ARHGEF10LQ9HCE6 1279 aa24.71■■□□□ 1.55
PKP4-209ENST00000479398 MGAMO43451 1857 aa24.7■■□□□ 1.55
PKP4-209ENST00000479398 HERVK_113P62684 666 aa24.7■■□□□ 1.54
PKP4-209ENST00000479398 ICA1Q05084 483 aa24.7■■□□□ 1.54
PKP4-209ENST00000479398 ALX1Q15699 326 aa24.7■■□□□ 1.54
PKP4-209ENST00000479398 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.7■■□□□ 1.54
PKP4-209ENST00000479398 SRRDQ9UH36 339 aa24.7■■□□□ 1.54
PKP4-209ENST00000479398 TMX2Q9Y320 296 aa24.7■■□□□ 1.54
PKP4-209ENST00000479398 PTCH2Q9Y6C5 1203 aa24.7■■□□□ 1.54
PKP4-209ENST00000479398 SLC3A2P08195 630 aaKnown RBP24.69■■□□□ 1.54
PKP4-209ENST00000479398 VCAM1P19320 739 aa24.69■■□□□ 1.54
PKP4-209ENST00000479398 PPARAQ07869 468 aa24.69■■□□□ 1.54
PKP4-209ENST00000479398 CLEC10AQ8IUN9 316 aa24.69■■□□□ 1.54
PKP4-209ENST00000479398 MORF4L1Q9UBU8 362 aa24.69■■□□□ 1.54
PKP4-209ENST00000479398 EEF2P13639 858 aaKnown RBP24.68■■□□□ 1.54
PKP4-209ENST00000479398 SH2D4AQ9H788 454 aa24.68■■□□□ 1.54
PKP4-209ENST00000479398 RBPJLQ9UBG7 517 aa24.68■■□□□ 1.54
PKP4-209ENST00000479398 HIP1O00291 1037 aa24.67■■□□□ 1.54
PKP4-209ENST00000479398 PRDM1O75626 825 aa24.67■■□□□ 1.54
PKP4-209ENST00000479398 HSPD1P10809 573 aaKnown RBP24.67■■□□□ 1.54
PKP4-209ENST00000479398 PDE4BQ07343 736 aa24.67■■□□□ 1.54
PKP4-209ENST00000479398 KIAA1755Q5JYT7 1200 aa24.67■■□□□ 1.54
PKP4-209ENST00000479398 ZNF589Q86UQ0 364 aaPredicted RBP24.67■■□□□ 1.54
PKP4-209ENST00000479398 GTF3C2Q8WUA4 911 aaPredicted RBP24.67■■□□□ 1.54
PKP4-209ENST00000479398 RPAP3Q9H6T3 665 aaPredicted RBP24.67■■□□□ 1.54
PKP4-209ENST00000479398 DOCK3Q8IZD9 2030 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 FGAP02671 866 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 MFAP1P55081 439 aaKnown RBP24.66■■□□□ 1.54
PKP4-209ENST00000479398 ATP2B2Q01814 1243 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 TTC22Q5TAA0 569 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 NBPF11Q86T75 865 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 GPRC5AQ8NFJ5 357 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 LPAR1Q92633 364 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 ARMC5Q96C12 935 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 VCPKMTQ9H867 229 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 TXNRD2Q9NNW7 524 aa24.66■■□□□ 1.54
PKP4-209ENST00000479398 CCDC171Q6TFL3 1326 aa24.65■■□□□ 1.54
PKP4-209ENST00000479398 MYPNQ86TC9 1320 aa24.65■■□□□ 1.54
PKP4-209ENST00000479398 TNPO2O14787 897 aaKnown RBP24.65■■□□□ 1.54
PKP4-209ENST00000479398 RGS19P49795 217 aa24.65■■□□□ 1.54
PKP4-209ENST00000479398 SLC9C1Q4G0N8 1177 aa24.65■■□□□ 1.54
PKP4-209ENST00000479398 POTEEQ6S8J3 1075 aa24.65■■□□□ 1.54
PKP4-209ENST00000479398 CWC27Q6UX04 472 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms