RNA–Protein interactions for RNA: ENST00000479042.1

LSP1P2-201, Transcript of LSP1 pseudogene 2, humanhuman

BASIC

Gene LSP1P2, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P2-201ENST00000479042 PRDM1O75626 825 aa13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 MYCP01106 439 aaPredicted RBP13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 C16orf86Q6ZW13 317 aa13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 AMOTL1Q8IY63 956 aa13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 TBC1D2Q9BYX2 928 aa13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 PTPN22Q9Y2R2 807 aa13.76□□□□□ -0.21
LSP1P2-201ENST00000479042 HTTP42858 3142 aa13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 PSMC4P43686 418 aa13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 ATP2B2Q01814 1243 aa13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 KIAA1755Q5JYT7 1200 aa13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 IFNL3Q8IZI9 196 aa13.75□□□□□ -0.21
LSP1P2-201ENST00000479042 ROBO3Q96MS0 1386 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 VCAM1P19320 739 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 OSBPP22059 807 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 IRX3P78415 501 aaPredicted RBP13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 KIF22Q14807 665 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 LRRFIP1Q32MZ4 808 aaKnown RBP13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 USP17L2Q6R6M4 530 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 SH3TC2Q8TF17 1288 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 PNMA3Q9UL41 463 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 GABRQQ9UN88 632 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 SLC45A1Q9Y2W3 748 aa13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
LSP1P2-201ENST00000479042 C19orf81C9J6K1 198 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 PATL2C9JE40 543 aaKnown RBP13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 RASA1P20936 1047 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 MLLT1Q03111 559 aaPredicted RBP13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 ICA1Q05084 483 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 PKN2Q16513 984 aaKnown RBP13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 SBK1Q52WX2 424 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 SAMD1Q6SPF0 538 aaPredicted RBP13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 TMEM179Q6ZVK1 233 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 P2RX7Q99572 595 aaKnown RBP13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 PAGR1Q9BTK6 254 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 NAPBQ9H115 298 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 GINM1Q9NU53 330 aa13.73□□□□□ -0.21
LSP1P2-201ENST00000479042 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 RAD21O60216 631 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 GNAT2P19087 354 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 HERVK_113P62684 666 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 PRKCZQ05513 592 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 PABPC4Q13310 644 aaKnown RBP eCLIP13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 KIAA1683Q9H0B3 1180 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
LSP1P2-201ENST00000479042 EEF2P13639 858 aaKnown RBP13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 SDSP20132 328 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 FCGRTP55899 365 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 PPARAQ07869 468 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 CHMP4CQ96CF2 233 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 C12orf42Q96LP6 360 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 NACAP1Q9BZK3 213 aa13.71□□□□□ -0.21
LSP1P2-201ENST00000479042 CENPFP49454 3210 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 CCDC171Q6TFL3 1326 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 PLXNB2O15031 1838 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 PARP14Q460N5 1801 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 TNPO2O14787 897 aaKnown RBP13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 HAND2P61296 217 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 FAM110CQ1W6H9 321 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 SLC9C1Q4G0N8 1177 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 TANGO6Q9C0B7 1094 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 IL25Q9H293 177 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 HELLSQ9NRZ9 838 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 SRRDQ9UH36 339 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 MYH4Q9Y623 1939 aa13.7□□□□□ -0.22
LSP1P2-201ENST00000479042 RLFQ13129 1914 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 CNMDO75829 334 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 USP14P54578 494 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 RAET1EQ8TD07 263 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 PORCNQ9H237 461 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
LSP1P2-201ENST00000479042 RBPJLQ9UBG7 517 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms