RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 POTEFA5A3E0 1075 aa22.57■■□□□ 1.2
SREBF1-212ENST00000478616 CDK8P49336 464 aa22.57■■□□□ 1.2
SREBF1-212ENST00000478616 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
SREBF1-212ENST00000478616 RAB3GAP1Q15042 981 aa22.57■■□□□ 1.2
SREBF1-212ENST00000478616 C16orf86Q6ZW13 317 aa22.57■■□□□ 1.2
SREBF1-212ENST00000478616 KIAA1683Q9H0B3 1180 aa22.57■■□□□ 1.2
SREBF1-212ENST00000478616 A0A0G2JMZ2 1700 aa22.57■■□□□ 1.2
SREBF1-212ENST00000478616 ROBO3Q96MS0 1386 aa22.56■■□□□ 1.2
SREBF1-212ENST00000478616 ZFYP08048 801 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-212ENST00000478616 PRKCZQ05513 592 aa22.56■■□□□ 1.2
SREBF1-212ENST00000478616 SBK1Q52WX2 424 aa22.56■■□□□ 1.2
SREBF1-212ENST00000478616 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
SREBF1-212ENST00000478616 NUCB1Q02818 461 aa22.55■■□□□ 1.2
SREBF1-212ENST00000478616 ZYXQ15942 572 aaKnown RBP22.55■■□□□ 1.2
SREBF1-212ENST00000478616 FAM110CQ1W6H9 321 aa22.55■■□□□ 1.2
SREBF1-212ENST00000478616 USP17L2Q6R6M4 530 aa22.55■■□□□ 1.2
SREBF1-212ENST00000478616 SMCR8Q8TEV9 937 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-212ENST00000478616 SH3TC2Q8TF17 1288 aa22.55■■□□□ 1.2
SREBF1-212ENST00000478616 RBPJLQ9UBG7 517 aa22.55■■□□□ 1.2
SREBF1-212ENST00000478616 MORF4L1Q9UBU8 362 aa22.55■■□□□ 1.2
SREBF1-212ENST00000478616 SWAP70Q9UH65 585 aa22.55■■□□□ 1.2
SREBF1-212ENST00000478616 MKI67P46013 3256 aaKnown RBP22.54■■□□□ 1.2
SREBF1-212ENST00000478616 CNMDO75829 334 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 GNRH1P01148 92 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 KIF22Q14807 665 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 CCDC129Q6ZRS4 1044 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 PLEKHM2Q8IWE5 1019 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 FSD1Q9BTV5 496 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 RWDD1Q9H446 243 aaPredicted RBP22.54■■□□□ 1.2
SREBF1-212ENST00000478616 PNMA3Q9UL41 463 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 PDE4DIPQ5VU43 2346 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 MYPNQ86TC9 1320 aa22.54■■□□□ 1.2
SREBF1-212ENST00000478616 FMNL1O95466 1100 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-212ENST00000478616 VCAM1P19320 739 aa22.53■■□□□ 1.2
SREBF1-212ENST00000478616 HERVK_113P62684 666 aa22.53■■□□□ 1.2
SREBF1-212ENST00000478616 Q3C1V9 767 aa22.53■■□□□ 1.2
SREBF1-212ENST00000478616 GIMAP6Q6P9H5 292 aa22.53■■□□□ 1.2
SREBF1-212ENST00000478616 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
SREBF1-212ENST00000478616 TMOD4Q9NZQ9 345 aa22.53■■□□□ 1.2
SREBF1-212ENST00000478616 GCLCP48506 637 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-212ENST00000478616 FCGRTP55899 365 aa22.52■■□□□ 1.2
SREBF1-212ENST00000478616 IFNL3Q8IZI9 196 aa22.52■■□□□ 1.2
SREBF1-212ENST00000478616 CABP5Q9NP86 173 aa22.52■■□□□ 1.2
SREBF1-212ENST00000478616 ARPP21Q9UBL0 812 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-212ENST00000478616 TAOK2Q9UL54 1235 aa22.52■■□□□ 1.2
SREBF1-212ENST00000478616 TACC3Q9Y6A5 838 aa22.52■■□□□ 1.2
SREBF1-212ENST00000478616 MYH4Q9Y623 1939 aa22.52■■□□□ 1.2
SREBF1-212ENST00000478616 RASA1P20936 1047 aa22.51■■□□□ 1.19
SREBF1-212ENST00000478616 PRMT2P55345 433 aa22.51■■□□□ 1.19
SREBF1-212ENST00000478616 MLLT1Q03111 559 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-212ENST00000478616 PABPC4Q13310 644 aaKnown RBP eCLIP22.51■■□□□ 1.191e-6■□□□□ 9.5
SREBF1-212ENST00000478616 ARHGEF6Q15052 776 aa22.51■■□□□ 1.19
SREBF1-212ENST00000478616 CATSPERGQ6ZRH7 1159 aa22.51■■□□□ 1.19
SREBF1-212ENST00000478616 TMEM179Q6ZVK1 233 aa22.51■■□□□ 1.19
SREBF1-212ENST00000478616 OSBPL3Q9H4L5 887 aa22.51■■□□□ 1.19
SREBF1-212ENST00000478616 GJD2Q9UKL4 321 aa22.51■■□□□ 1.19
SREBF1-212ENST00000478616 COL11A1P12107 1806 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-212ENST00000478616 PATL2C9JE40 543 aaKnown RBP22.5■■□□□ 1.19
SREBF1-212ENST00000478616 MPHOSPH10O00566 681 aaKnown RBP22.5■■□□□ 1.19
SREBF1-212ENST00000478616 PDE4AP27815 886 aa22.5■■□□□ 1.19
SREBF1-212ENST00000478616 FLT3LGP49771 235 aa22.5■■□□□ 1.19
SREBF1-212ENST00000478616 MTFR1Q15390 333 aa22.5■■□□□ 1.19
SREBF1-212ENST00000478616 SLC9C1Q4G0N8 1177 aa22.5■■□□□ 1.19
SREBF1-212ENST00000478616 VPS53Q5VIR6 699 aa22.5■■□□□ 1.19
SREBF1-212ENST00000478616 EVI5LQ96CN4 794 aa22.5■■□□□ 1.19
SREBF1-212ENST00000478616 FAM227BQ96M60 508 aa22.5■■□□□ 1.19
SREBF1-212ENST00000478616 A0A0D9SFI3 127 aa22.49■■□□□ 1.19
SREBF1-212ENST00000478616 IRX3P78415 501 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-212ENST00000478616 STK11IPQ8N1F8 1099 aa22.49■■□□□ 1.19
SREBF1-212ENST00000478616 FEZ1Q99689 392 aa22.49■■□□□ 1.19
SREBF1-212ENST00000478616 IGKV6D-41A0A0C4DH26 115 aa22.48■■□□□ 1.19
SREBF1-212ENST00000478616 MINDY4BA8MYZ0 360 aa22.48■■□□□ 1.19
SREBF1-212ENST00000478616 CCDC17Q96LX7 622 aa22.48■■□□□ 1.19
SREBF1-212ENST00000478616 PORCNQ9H237 461 aa22.48■■□□□ 1.19
SREBF1-212ENST00000478616 RPAP3Q9H6T3 665 aaPredicted RBP22.48■■□□□ 1.19
SREBF1-212ENST00000478616 TMX2Q9Y320 296 aa22.48■■□□□ 1.19
SREBF1-212ENST00000478616 SPDYE16A6NNV3 312 aaPredicted RBP22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L15C9J2P7 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L13C9JLJ4 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L11C9JVI0 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L18D6R9N7 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L22D6RA61 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L17D6RBQ6 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L19D6RCP7 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L20D6RJB6 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 TNPO2O14787 897 aaKnown RBP22.47■■□□□ 1.19
SREBF1-212ENST00000478616 GNAT2P19087 354 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 EN2P19622 333 aaPredicted RBP22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP14P54578 494 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 USP17L24Q0WX57 530 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 BTBD7Q9P203 1132 aa22.47■■□□□ 1.19
SREBF1-212ENST00000478616 MYCP01106 439 aaPredicted RBP22.46■■□□□ 1.19
SREBF1-212ENST00000478616 EEF2P13639 858 aaKnown RBP22.46■■□□□ 1.19
SREBF1-212ENST00000478616 ELNP15502 786 aa22.46■■□□□ 1.19
SREBF1-212ENST00000478616 GRK4P32298 578 aa22.46■■□□□ 1.19
SREBF1-212ENST00000478616 ICA1Q05084 483 aa22.46■■□□□ 1.19
SREBF1-212ENST00000478616 LBX2Q6XYB7 198 aa22.46■■□□□ 1.19
SREBF1-212ENST00000478616 ZNF589Q86UQ0 364 aaPredicted RBP22.46■■□□□ 1.19
SREBF1-212ENST00000478616 PRDM1O75626 825 aa22.45■■□□□ 1.18
SREBF1-212ENST00000478616 HOXD10P28358 340 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms