RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 RALGPS1Q5JS13 557 aa6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 NPM2Q86SE8 214 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 TTC6Q86TZ1 520 aa6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 CREG2Q8IUH2 290 aa6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 ACSF2Q96CM8 615 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 FAM161BQ96MY7 647 aa6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 NSUN3Q9H649 340 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 CORINQ9Y5Q5 1042 aa6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 DNAJC25-GNG10A0A024R161 153 aa6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 BPNT1O95861 308 aa6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 RLBP1P12271 317 aa6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 PLCG1P19174 1290 aa6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 MCATQ8IVS2 390 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 FAM13CQ8NE31 585 aa6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 PPP1R16BQ96T49 567 aa6.89□□□□□ -1.31
CDC42BPA-212ENST00000478573 ERCC3P19447 782 aa6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 TPP2P29144 1249 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 ERVFC1P60507 584 aa6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 DNAJC14Q6Y2X3 702 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 PHC3Q8NDX5 983 aa6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 ABHD4Q8TB40 342 aa6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 PIWIL2Q8TC59 973 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 TMEM59LQ9UK28 342 aa6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 ADAM30Q9UKF2 790 aa6.88□□□□□ -1.31
CDC42BPA-212ENST00000478573 UPK3BL1B0FP48 263 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 UPK3BL2E5RIL1 263 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 ESR1P03372 595 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 DAB2P98082 770 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 BNC2Q6ZN30 1099 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 BHLHE22Q8NFJ8 381 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 DNAJB8Q8NHS0 232 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 Q96M66 194 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 TRIT1Q9H3H1 467 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 CEP131Q9UPN4 1083 aa6.87□□□□□ -1.31
CDC42BPA-212ENST00000478573 TSPAN15O95858 294 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 TNNI2P48788 182 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 FBXO15Q8NCQ5 510 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 MYLIPQ8WY64 445 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 TOX2Q96NM4 488 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 NOC4LQ9BVI4 516 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 ADAMTS10Q9H324 1103 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 KCNK12Q9HB15 430 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 KLHL3Q9UH77 587 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 DUSP13Q9UII6 198 aa6.86□□□□□ -1.31
CDC42BPA-212ENST00000478573 NFIBO00712 420 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 CTSHP09668 335 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 LTKP29376 864 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 ST13P50502 369 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 YARSP54577 528 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 ANKLE2Q86XL3 938 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 CYB5D2Q8WUJ1 264 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 DUSP15Q9H1R2 295 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 EPB41L4BQ9H329 900 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 DCP1AQ9NPI6 582 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 GPATCH2Q9NW75 528 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 KCNH3Q9ULD8 1083 aa6.85□□□□□ -1.31
CDC42BPA-212ENST00000478573 GRIN3BO60391 1043 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 PF4P02776 101 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 C1QTNF9P0C862 333 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 CFPP27918 469 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 EGR3Q06889 387 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 CAMK2GQ13555 558 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 FBLN7Q53RD9 439 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 PPP1R13LQ8WUF5 828 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 MRS2Q9HD23 443 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 VTI1BQ9UEU0 232 aa6.84□□□□□ -1.31
CDC42BPA-212ENST00000478573 LRRN2O75325 713 aa6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 F13A1P00488 732 aa6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 GBP2P32456 591 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 TRHRP34981 398 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 RANGAP1P46060 587 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 LMNB2Q03252 620 aa6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 FAM160A1Q05DH4 1040 aa6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 TMC4Q7Z404 712 aa6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 LRRC56Q8IYG6 542 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 DTWD2Q8NBA8 298 aa6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 ZSCAN18Q8TBC5 510 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 CRELD1Q96HD1 420 aa6.83□□□□□ -1.32
CDC42BPA-212ENST00000478573 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 CILPO75339 1184 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 TMEM253P0C7T8 217 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 CHMP4BP1P59074 171 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 GAB4Q2WGN9 574 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 CCDC84Q86UT8 332 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 RELL1Q8IUW5 271 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 GATAD2BQ8WXI9 593 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 SYTL4Q96C24 671 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 GPR62Q9BZJ7 368 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 REV1Q9UBZ9 1251 aa6.82□□□□□ -1.32
CDC42BPA-212ENST00000478573 SORBS3O60504 671 aa6.81□□□□□ -1.32
CDC42BPA-212ENST00000478573 HPXP02790 462 aa6.81□□□□□ -1.32
CDC42BPA-212ENST00000478573 SNAP47Q5SQN1 464 aa6.81□□□□□ -1.32
CDC42BPA-212ENST00000478573 TSPYL5Q86VY4 417 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-212ENST00000478573 PHACTR4Q8IZ21 702 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms