RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 DPH2Q9BQC3 489 aaPredicted RBP7.77□□□□□ -1.17
LMBR1-216ENST00000477983 FAM221AA4D161 298 aa7.76□□□□□ -1.17
LMBR1-216ENST00000477983 CILPO75339 1184 aa7.76□□□□□ -1.17
LMBR1-216ENST00000477983 ESR1P03372 595 aa7.76□□□□□ -1.17
LMBR1-216ENST00000477983 XPCQ01831 940 aaPredicted RBP7.76□□□□□ -1.17
LMBR1-216ENST00000477983 LMNB2Q03252 620 aa7.76□□□□□ -1.17
LMBR1-216ENST00000477983 MLANAQ16655 118 aa7.76□□□□□ -1.17
LMBR1-216ENST00000477983 LIN37Q96GY3 246 aaPredicted RBP7.76□□□□□ -1.17
LMBR1-216ENST00000477983 ALPK1Q96QP1 1244 aa7.76□□□□□ -1.17
LMBR1-216ENST00000477983 DUSP15Q9H1R2 295 aaPredicted RBP7.76□□□□□ -1.17
LMBR1-216ENST00000477983 SRFP11831 508 aa7.75□□□□□ -1.17
LMBR1-216ENST00000477983 PKN1Q16512 942 aa7.75□□□□□ -1.17
LMBR1-216ENST00000477983 TMEM67Q5HYA8 995 aa7.75□□□□□ -1.17
LMBR1-216ENST00000477983 RSRP1Q9BUV0 290 aa7.75□□□□□ -1.17
LMBR1-216ENST00000477983 CORINQ9Y5Q5 1042 aa7.75□□□□□ -1.17
LMBR1-216ENST00000477983 PRR36Q9H6K5 1346 aa7.75□□□□□ -1.17
LMBR1-216ENST00000477983 CAMK2GQ13555 558 aaPredicted RBP7.74□□□□□ -1.17
LMBR1-216ENST00000477983 DIEXFQ68CQ4 756 aaKnown RBP7.74□□□□□ -1.17
LMBR1-216ENST00000477983 BNC2Q6ZN30 1099 aaPredicted RBP7.74□□□□□ -1.17
LMBR1-216ENST00000477983 GATAD2BQ8WXI9 593 aa7.74□□□□□ -1.17
LMBR1-216ENST00000477983 PLCG1P19174 1290 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 GAB4Q2WGN9 574 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 PRR23BQ6ZRT6 265 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 CILP2Q8IUL8 1156 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 CYB5D2Q8WUJ1 264 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 CRELD1Q96HD1 420 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 RHOVQ96L33 236 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 FAM161BQ96MY7 647 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 GPR62Q9BZJ7 368 aa7.73□□□□□ -1.17
LMBR1-216ENST00000477983 UPK3BL1B0FP48 263 aa7.72□□□□□ -1.17
LMBR1-216ENST00000477983 UPK3BL2E5RIL1 263 aa7.72□□□□□ -1.17
LMBR1-216ENST00000477983 SORBS3O60504 671 aa7.72□□□□□ -1.17
LMBR1-216ENST00000477983 PF4P02776 101 aa7.72□□□□□ -1.17
LMBR1-216ENST00000477983 TTC6Q86TZ1 520 aa7.72□□□□□ -1.17
LMBR1-216ENST00000477983 SLFN12Q8IYM2 578 aa7.72□□□□□ -1.17
LMBR1-216ENST00000477983 TRIT1Q9H3H1 467 aaKnown RBP7.72□□□□□ -1.17
LMBR1-216ENST00000477983 DNAJC25-GNG10A0A024R161 153 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 WASH4PA8MWX3 477 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 BPNT1O95861 308 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 F13A1P00488 732 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 TPP2P29144 1249 aaPredicted RBP7.71□□□□□ -1.18
LMBR1-216ENST00000477983 RALGPS1Q5JS13 557 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 RELL1Q8IUW5 271 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 TMEM74Q96NL1 305 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 SLAMF8Q9P0V8 285 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 TMEM59LQ9UK28 342 aa7.71□□□□□ -1.18
LMBR1-216ENST00000477983 ERCC3P19447 782 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 YARSP54577 528 aaKnown RBP7.7□□□□□ -1.18
LMBR1-216ENST00000477983 KRTAP19-4Q3LI73 84 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 LCE4AQ5TA78 99 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 MPZL3Q6UWV2 235 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 CREG2Q8IUH2 290 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 DTWD2Q8NBA8 298 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 FAM13CQ8NE31 585 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 PPP1R16BQ96T49 567 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 KRTAP4-2Q9BYR5 136 aa7.7□□□□□ -1.18
LMBR1-216ENST00000477983 TSPAN15O95858 294 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 HPXP02790 462 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 RAC2P15153 192 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 PWP1Q13610 501 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 FBLN7Q53RD9 439 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 TSPYL5Q86VY4 417 aaPredicted RBP7.69□□□□□ -1.18
LMBR1-216ENST00000477983 ABHD4Q8TB40 342 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 RNF141Q8WVD5 230 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 ADAMTS10Q9H324 1103 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 GPATCH2Q9NW75 528 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 KCNH3Q9ULD8 1083 aa7.69□□□□□ -1.18
LMBR1-216ENST00000477983 POLR3KQ9Y2Y1 108 aaPredicted RBP7.69□□□□□ -1.18
LMBR1-216ENST00000477983 KRT1P04264 644 aa7.68□□□□□ -1.18
LMBR1-216ENST00000477983 RAP1GAPP47736 663 aa7.68□□□□□ -1.18
LMBR1-216ENST00000477983 TAGLNQ01995 201 aaKnown RBP7.68□□□□□ -1.18
LMBR1-216ENST00000477983 SPOCD1Q6ZMY3 1216 aa7.68□□□□□ -1.18
LMBR1-216ENST00000477983 REV1Q9UBZ9 1251 aa7.68□□□□□ -1.18
LMBR1-216ENST00000477983 CHURC1-FNTBB4DL54 471 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 F6X3S4 739 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 GARTP22102 1010 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 GBP2P32456 591 aaPredicted RBP7.67□□□□□ -1.18
LMBR1-216ENST00000477983 ERVFC1P60507 584 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 MPP2Q14168 576 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 SYDE1Q6ZW31 735 aaPredicted RBP7.67□□□□□ -1.18
LMBR1-216ENST00000477983 FBXO15Q8NCQ5 510 aaPredicted RBP7.67□□□□□ -1.18
LMBR1-216ENST00000477983 MYLIPQ8WY64 445 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 CCDC74BQ96LY2 380 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 SP110Q9HB58 689 aa7.67□□□□□ -1.18
LMBR1-216ENST00000477983 HTR3BO95264 441 aa7.66□□□□□ -1.18
LMBR1-216ENST00000477983 ITGAEP38570 1179 aa7.66□□□□□ -1.18
LMBR1-216ENST00000477983 HK2P52789 917 aa7.66□□□□□ -1.18
LMBR1-216ENST00000477983 VWCEQ96DN2 955 aa7.66□□□□□ -1.18
LMBR1-216ENST00000477983 DUSP13Q9UII6 198 aa7.66□□□□□ -1.18
LMBR1-216ENST00000477983 RBM47A0AV96 593 aaKnown RBP7.65□□□□□ -1.18
LMBR1-216ENST00000477983 LRRN2O75325 713 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 REC114Q7Z4M0 266 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 PDZD8Q8NEN9 1154 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 BAHD1Q8TBE0 780 aaPredicted RBP7.65□□□□□ -1.18
LMBR1-216ENST00000477983 KREMEN1Q96MU8 473 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 TOX2Q96NM4 488 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 ASPNQ9BXN1 380 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 NSUN3Q9H649 340 aaKnown RBP7.65□□□□□ -1.18
LMBR1-216ENST00000477983 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 KCNQ5Q9NR82 932 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms