RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PLA2G12BQ9BX93 195 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 POLR3EQ9NVU0 708 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 SAP30BPQ9UHR5 308 aaKnown RBP11.07□□□□□ -0.64
CMC1-209ENST00000477739 AKR1B15C9JRZ8 316 aaPredicted RBP11.07□□□□□ -0.64
CMC1-209ENST00000477739 TRIM66O15016 1216 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 XBP1P17861 261 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 ANKRD20A12PQ8NF67 263 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 RIN2Q8WYP3 895 aaPredicted RBP11.07□□□□□ -0.64
CMC1-209ENST00000477739 TUBGCP6Q96RT7 1819 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 MROH5Q6ZUA9 1318 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 KIF2AO00139 706 aaPredicted RBP11.07□□□□□ -0.64
CMC1-209ENST00000477739 CXCR5P32302 372 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 KRT9P35527 623 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 CYP27A1Q02318 531 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 NCAPHQ15003 741 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 HEATR3Q7Z4Q2 680 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 HPS3Q969F9 1004 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 TRIM47Q96LD4 638 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 GDAQ9Y2T3 454 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 TNKSO95271 1327 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 F8W031 263 aaPredicted RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 LEKR1Q6ZMV7 388 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 ZNF654Q8IZM8 581 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 BRMS1Q9HCU9 246 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 GNL3LQ9NVN8 582 aaKnown RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 CDHR2Q9BYE9 1310 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 SYNRGQ9UMZ2 1314 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 SH2B2O14492 632 aaPredicted RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 MYO1BO43795 1136 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 BMP6P22004 513 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 AGXT2Q9BYV1 514 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 DEF6Q9H4E7 631 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 USP17L21D6R901 530 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 CYP2D6P10635 497 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 VEGFAP15692 232 aaPredicted RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 TRIM21P19474 475 aaKnown RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 EARS2Q5JPH6 523 aaKnown RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 SARM1Q6SZW1 724 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
CMC1-209ENST00000477739 KANSL2Q9H9L4 492 aa11.06□□□□□ -0.64
CMC1-209ENST00000477739 AFDNP55196 1824 aaKnown RBP11.05□□□□□ -0.64
CMC1-209ENST00000477739 ZMYM6O95789 1325 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 SIK1P57059 783 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 CATIPQ7Z7H3 387 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 GOLGA1Q92805 767 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 TMEM87BQ96K49 555 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 ARHGAP6O43182 974 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 PTGDRQ13258 359 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 RASGRP2Q7LDG7 609 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
CMC1-209ENST00000477739 KRT23Q9C075 422 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 TBC1D7Q9P0N9 293 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 ZNF652Q9Y2D9 606 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 MRC1P22897 1456 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 ALS2Q96Q42 1657 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 WNT7AO00755 349 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 SMARCAL1Q9NZC9 954 aa11.05□□□□□ -0.64
CMC1-209ENST00000477739 A0A1W2PQ27 194 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 A0A1W2PQ64 194 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 A0A1W2PQD8 194 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 ERVV-1B6SEH8 477 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 FOXP2O15409 715 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 SASH3O75995 380 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 PLA2G4AP47712 749 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 CAVIN4Q5BKX8 364 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 IQCA1Q86XH1 822 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 TICAM2Q86XR7 235 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 ANKRD18AQ8IVF6 992 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 EPB41L4AQ9HCS5 686 aaPredicted RBP11.04□□□□□ -0.64
CMC1-209ENST00000477739 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 CCP110O43303 1012 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 ATP2C2O75185 946 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 MTIF2P46199 727 aaKnown RBP11.04□□□□□ -0.64
CMC1-209ENST00000477739 RBM43Q6ZSC3 357 aaKnown RBP11.04□□□□□ -0.64
CMC1-209ENST00000477739 FANCBQ8NB91 859 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 WASF1Q92558 559 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 MAGEC2Q9UBF1 373 aaPredicted RBP11.04□□□□□ -0.64
CMC1-209ENST00000477739 CTAGE9A4FU28 777 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 CUTAO60888 179 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 STAT6P42226 847 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 CHRNDQ07001 517 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 LONRF2Q1L5Z9 754 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
CMC1-209ENST00000477739 RAD9BQ6WBX8 426 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 DYMQ7RTS9 669 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 KSR1Q8IVT5 923 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 MKNK2Q9HBH9 465 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 MCM9Q9NXL9 1143 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 IMPACTQ9P2X3 320 aa11.04□□□□□ -0.64
CMC1-209ENST00000477739 CDC25BP30305 580 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms