RNA–Protein interactions for RNA: ENST00000477581.1

DENND1B-208, Transcript of DENN domain containing 1B, humanhuman

TSL 3

Gene DENND1B, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-208ENST00000477581 USP17L22D6RA61 530 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 USP17L17D6RBQ6 530 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 USP17L19D6RCP7 530 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 USP17L20D6RJB6 530 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 APBB1O00213 710 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 GOLIM4O00461 696 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 PDE6AP16499 860 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 USP17L24Q0WX57 530 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 ZSCAN25Q6NSZ9 544 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
DENND1B-208ENST00000477581 P2RX7Q99572 595 aaKnown RBP17.24■□□□□ 0.35
DENND1B-208ENST00000477581 RIOK1Q9BRS2 568 aaKnown RBP17.24■□□□□ 0.35
DENND1B-208ENST00000477581 HMX1Q9NP08 348 aaPredicted RBP17.24■□□□□ 0.35
DENND1B-208ENST00000477581 PAK6Q9NQU5 681 aaPredicted RBP17.24■□□□□ 0.35
DENND1B-208ENST00000477581 XRCC5P13010 732 aaKnown RBP17.23■□□□□ 0.35
DENND1B-208ENST00000477581 DEFB118Q96PH6 123 aa17.23■□□□□ 0.35
DENND1B-208ENST00000477581 LNPKQ9C0E8 428 aa17.23■□□□□ 0.35
DENND1B-208ENST00000477581 KIAA1683Q9H0B3 1180 aa17.23■□□□□ 0.35
DENND1B-208ENST00000477581 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.23■□□□□ 0.35
DENND1B-208ENST00000477581 PAG1Q9NWQ8 432 aa17.23■□□□□ 0.35
DENND1B-208ENST00000477581 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
DENND1B-208ENST00000477581 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
DENND1B-208ENST00000477581 NDUFB9Q9Y6M9 179 aa17.23■□□□□ 0.35
DENND1B-208ENST00000477581 RPTORQ8N122 1335 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 ZNF532Q9HCE3 1301 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 ATP5JP18859 108 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 ERVK-9P63128 1117 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 ERVK-24P63145 666 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 UBE2Q1Q7Z7E8 422 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 SH2D4AQ9H788 454 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
DENND1B-208ENST00000477581 H0YGN5 161 aa17.21■□□□□ 0.35
DENND1B-208ENST00000477581 RGS2P41220 211 aa17.21■□□□□ 0.35
DENND1B-208ENST00000477581 CRISPLD2Q9H0B8 497 aa17.21■□□□□ 0.35
DENND1B-208ENST00000477581 EMILIN3Q9NT22 766 aa17.21■□□□□ 0.35
DENND1B-208ENST00000477581 ATP8A2Q9NTI2 1148 aa17.21■□□□□ 0.35
DENND1B-208ENST00000477581 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
DENND1B-208ENST00000477581 MYH1P12882 1939 aa17.2■□□□□ 0.34
DENND1B-208ENST00000477581 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
DENND1B-208ENST00000477581 JAG1P78504 1218 aa17.2■□□□□ 0.34
DENND1B-208ENST00000477581 NECAB2Q7Z6G3 386 aa17.2■□□□□ 0.34
DENND1B-208ENST00000477581 PLEKHH3Q7Z736 793 aa17.2■□□□□ 0.34
DENND1B-208ENST00000477581 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
DENND1B-208ENST00000477581 MPHOSPH10O00566 681 aaKnown RBP17.19■□□□□ 0.34
DENND1B-208ENST00000477581 EVI5O60447 810 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 SHMT1P34896 483 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 PLCD1P51178 756 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 ZYXQ15942 572 aaKnown RBP17.19■□□□□ 0.34
DENND1B-208ENST00000477581 LBX2Q6XYB7 198 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 TMEM179Q6ZVK1 233 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 APBA2Q99767 749 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 HAUS7Q99871 368 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 DCP1AQ9NPI6 582 aaPredicted RBP17.19■□□□□ 0.34
DENND1B-208ENST00000477581 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 IVNS1ABPQ9Y6Y0 642 aa17.19■□□□□ 0.34
DENND1B-208ENST00000477581 TCRBV5S4A2TA0A5A2 114 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 SMARCA5O60264 1052 aaPredicted RBP17.18■□□□□ 0.34
DENND1B-208ENST00000477581 VCAM1P19320 739 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 CYP2B6P20813 491 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 ADD2P35612 726 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 GABPAQ06546 454 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 UBE3CQ15386 1083 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 CATSPERGQ6ZRH7 1159 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 BOLA2Q9H3K6 86 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 ARHGEF10LQ9HCE6 1279 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
DENND1B-208ENST00000477581 NAV1Q8NEY1 1877 aa17.18■□□□□ 0.34
DENND1B-208ENST00000477581 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
DENND1B-208ENST00000477581 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
DENND1B-208ENST00000477581 DDX60LQ5H9U9 1706 aaKnown RBP17.17■□□□□ 0.34
DENND1B-208ENST00000477581 LCORLQ8N3X6 602 aa17.17■□□□□ 0.34
DENND1B-208ENST00000477581 LPAR1Q92633 364 aa17.17■□□□□ 0.34
DENND1B-208ENST00000477581 CCDC17Q96LX7 622 aa17.17■□□□□ 0.34
DENND1B-208ENST00000477581 NBPF3Q9H094 633 aa17.17■□□□□ 0.34
DENND1B-208ENST00000477581 TXNRD2Q9NNW7 524 aa17.17■□□□□ 0.34
DENND1B-208ENST00000477581 HOXC10Q9NYD6 342 aa17.17■□□□□ 0.34
DENND1B-208ENST00000477581 MBD4O95243 580 aa17.16■□□□□ 0.34
DENND1B-208ENST00000477581 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
DENND1B-208ENST00000477581 MX1P20591 662 aa17.16■□□□□ 0.34
DENND1B-208ENST00000477581 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
DENND1B-208ENST00000477581 MB21D1Q8N884 522 aa17.16■□□□□ 0.34
DENND1B-208ENST00000477581 SDR42E1Q8WUS8 393 aa17.16■□□□□ 0.34
DENND1B-208ENST00000477581 TRIB2Q92519 343 aa17.16■□□□□ 0.34
DENND1B-208ENST00000477581 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
DENND1B-208ENST00000477581 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
DENND1B-208ENST00000477581 A0A1W2PPC1 479 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 SLC15A5A6NIM6 579 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 ERC2O15083 957 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 MAP2K5Q13163 448 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 SEPT2Q15019 361 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 MORN1Q5T089 497 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 MAP3K21Q5TCX8 1036 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 WDR78Q5VTH9 848 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 MFSD14CQ5VZR4 134 aa17.15■□□□□ 0.34
DENND1B-208ENST00000477581 CHRDL2Q6WN34 429 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms