RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 MYO5AQ9Y4I1 1855 aaKnown RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 IPO8O15397 1037 aaKnown RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 ASNSP08243 561 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 MAPK4P31152 587 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 HERVK_113P62684 666 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 CACNB2Q08289 660 aaPredicted RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 MORN1Q5T089 497 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 POTEEQ6S8J3 1075 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 SPATA5Q8NB90 893 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 P2RX7Q99572 595 aaKnown RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 TMEM121BQ9BXQ6 578 aaPredicted RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 COL25A1Q9BXS0 654 aaPredicted RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 UBE2OQ9C0C9 1292 aaKnown RBP9.43□□□□□ -0.9
RBBP4-211ENST00000477563 TXNRD2Q9NNW7 524 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 RBPJLQ9UBG7 517 aa9.43□□□□□ -0.9
RBBP4-211ENST00000477563 IGHA2P01877 340 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 CYP2B6P20813 491 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 PPP4CP60510 307 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 ERVK-24P63145 666 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
RBBP4-211ENST00000477563 MTMR2Q13614 643 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 LRRC26Q2I0M4 334 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 Q3C1V9 767 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 FOXP4Q8IVH2 680 aaPredicted RBP9.42□□□□□ -0.9
RBBP4-211ENST00000477563 DNAJC18Q9H819 358 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 STK24Q9Y6E0 443 aa9.42□□□□□ -0.9
RBBP4-211ENST00000477563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
RBBP4-211ENST00000477563 MYH1P12882 1939 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 ZNF236Q9UL36 1845 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 ZKSCAN1P17029 563 aaPredicted RBP9.41□□□□□ -0.9
RBBP4-211ENST00000477563 CCND3P30281 292 aaPredicted RBP9.41□□□□□ -0.9
RBBP4-211ENST00000477563 RGS2P41220 211 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 JAG1P78504 1218 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 TFCP2Q12800 502 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 GPR142Q7Z601 462 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.41□□□□□ -0.9
RBBP4-211ENST00000477563 C12orf42Q96LP6 360 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 GUCD1Q96NT3 240 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 APBA2Q99767 749 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 TMOD4Q9NZQ9 345 aa9.41□□□□□ -0.9
RBBP4-211ENST00000477563 HOXC6P09630 235 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 MCAMP43121 646 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 PDE3AQ14432 1141 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 CCL14Q16627 93 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 PI16Q6UXB8 463 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 ATF7IPQ6VMQ6 1270 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 LBX2Q6XYB7 198 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 TBC1D9Q6ZT07 1266 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 PLEKHH3Q7Z736 793 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 SH3RF3Q8TEJ3 882 aaPredicted RBP9.4□□□□□ -0.9
RBBP4-211ENST00000477563 MEIS3Q99687 375 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 PORCNQ9H237 461 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 NOB1Q9ULX3 412 aaKnown RBP9.4□□□□□ -0.9
RBBP4-211ENST00000477563 RABGAP1Q9Y3P9 1069 aa9.4□□□□□ -0.9
RBBP4-211ENST00000477563 FLT1P17948 1338 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 SRGAP3O43295 1099 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 MSCO60682 206 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 PEX10O60683 326 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 CNMDO75829 334 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 BAG3O95817 575 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 GNAI3P08754 354 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 UQCRFS1P1P0C7P4 283 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 MAP2K5Q13163 448 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L2Q6R6M4 530 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 LPAR1Q92633 364 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 EDC3Q96F86 508 aaKnown RBP9.39□□□□□ -0.91
RBBP4-211ENST00000477563 EMILIN3Q9NT22 766 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
RBBP4-211ENST00000477563 DNM1LO00429 736 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 GLRX3O76003 335 aaKnown RBP9.38□□□□□ -0.91
RBBP4-211ENST00000477563 TRIM27P14373 513 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 PTPREP23469 700 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
RBBP4-211ENST00000477563 GRB14Q14449 540 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 TATDN1Q6P1N9 297 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 ZNF512BQ96KM6 892 aaPredicted RBP9.38□□□□□ -0.91
RBBP4-211ENST00000477563 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 GPR108Q9NPR9 543 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 FLRT1Q9NZU1 646 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 RAI14Q9P0K7 980 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 LRP2BPQ9P2M1 347 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 DDX20Q9UHI6 824 aaKnown RBP9.38□□□□□ -0.91
RBBP4-211ENST00000477563 A0A0G2JMZ2 1700 aa9.38□□□□□ -0.91
RBBP4-211ENST00000477563 ZNFX1Q9P2E3 1918 aaKnown RBP9.37□□□□□ -0.91
RBBP4-211ENST00000477563 SLC15A5A6NIM6 579 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 CCNA1P78396 465 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 SNX17Q15036 470 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms