RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LLGL2Q6P1M3 1020 aa5.73□□□□□ -1.49
XRN1-211ENST00000477237 CDH24Q86UP0 819 aa5.73□□□□□ -1.49
XRN1-211ENST00000477237 PIWIL2Q8TC59 973 aaKnown RBP5.73□□□□□ -1.49
XRN1-211ENST00000477237 XAGE3Q8WTP9 111 aa5.73□□□□□ -1.49
XRN1-211ENST00000477237 CITED4Q96RK1 184 aa5.73□□□□□ -1.49
XRN1-211ENST00000477237 DUSP15Q9H1R2 295 aaPredicted RBP5.73□□□□□ -1.49
XRN1-211ENST00000477237 NLRP2Q9NX02 1062 aa5.73□□□□□ -1.49
XRN1-211ENST00000477237 FITM1A5D6W6 292 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 CYP7A1P22680 504 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 AFF3P51826 1226 aaKnown RBP5.72□□□□□ -1.49
XRN1-211ENST00000477237 EFEMP1Q12805 493 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 NR0B2Q15466 257 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 VMACQ2NL98 169 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 PRAMEF13Q5VWM6 474 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 ERICH6BQ5W0A0 696 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 NXPE4Q6UWF7 544 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 TPTE2Q6XPS3 522 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 GLYCTKQ8IVS8 523 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 OXR1Q8N573 874 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 C3orf58Q8NDZ4 430 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 CCDC97Q96F63 343 aaPredicted RBP5.72□□□□□ -1.49
XRN1-211ENST00000477237 COX4I2Q96KJ9 171 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 WNT10AQ9GZT5 417 aa5.72□□□□□ -1.49
XRN1-211ENST00000477237 SLC22A31A6NKX4 558 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 CST3P01034 146 aaPredicted RBP5.71□□□□□ -1.5
XRN1-211ENST00000477237 INSRRP14616 1297 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 GALK1P51570 392 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 PTPN11Q06124 597 aaPredicted RBP5.71□□□□□ -1.5
XRN1-211ENST00000477237 EGR3Q06889 387 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 SPATS1Q496A3 300 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 SYT8Q8NBV8 401 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 PLPPR2Q96GM1 343 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 SIGLEC10Q96LC7 697 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 Q96M66 194 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 ADAM7Q9H2U9 754 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 SAMM50Q9Y512 469 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 IRAK3Q9Y616 596 aa5.71□□□□□ -1.5
XRN1-211ENST00000477237 ETF1P62495 437 aaKnown RBP5.7□□□□□ -1.5
XRN1-211ENST00000477237 KRTAP1-1Q07627 177 aa5.7□□□□□ -1.5
XRN1-211ENST00000477237 PUM1Q14671 1186 aaKnown RBP eCLIP5.7□□□□□ -1.5
XRN1-211ENST00000477237 LRRC14Q15048 493 aa5.7□□□□□ -1.5
XRN1-211ENST00000477237 HID1Q8IV36 788 aa5.7□□□□□ -1.5
XRN1-211ENST00000477237 TMC1Q8TDI8 760 aa5.7□□□□□ -1.5
XRN1-211ENST00000477237 SHISA4Q96DD7 197 aa5.7□□□□□ -1.5
XRN1-211ENST00000477237 EPB41L4AQ9HCS5 686 aaPredicted RBP5.7□□□□□ -1.5
XRN1-211ENST00000477237 DUSP13Q9UII6 198 aa5.7□□□□□ -1.5
XRN1-211ENST00000477237 MBD1Q9UIS9 605 aaPredicted RBP5.7□□□□□ -1.5
XRN1-211ENST00000477237 FBXO24O75426 580 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 SERPINB4P48594 390 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 EPHB3P54753 998 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 SCARA3Q6AZY7 606 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 HDXQ7Z353 690 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 TEPSINQ96N21 525 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 EBF1Q9UH73 591 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 GPR160Q9UJ42 338 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 SERPINA10Q9UK55 444 aa5.69□□□□□ -1.5
XRN1-211ENST00000477237 CDK8P49336 464 aa5.68□□□□□ -1.5
XRN1-211ENST00000477237 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.68□□□□□ -1.5
XRN1-211ENST00000477237 ALKBH8Q96BT7 664 aaKnown RBP5.68□□□□□ -1.5
XRN1-211ENST00000477237 SRSF3P84103 164 aaKnown RBP5.67□□□□□ -1.5
XRN1-211ENST00000477237 PLP2Q04941 152 aa5.67□□□□□ -1.5
XRN1-211ENST00000477237 SNX17Q15036 470 aa5.67□□□□□ -1.5
XRN1-211ENST00000477237 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.67□□□□□ -1.5
XRN1-211ENST00000477237 TSPYL5Q86VY4 417 aaPredicted RBP5.67□□□□□ -1.5
XRN1-211ENST00000477237 DHX38Q92620 1227 aaKnown RBP5.67□□□□□ -1.5
XRN1-211ENST00000477237 CEP44Q9C0F1 390 aa5.67□□□□□ -1.5
XRN1-211ENST00000477237 TRIT1Q9H3H1 467 aaKnown RBP5.67□□□□□ -1.5
XRN1-211ENST00000477237 PCDHA11Q9Y5I1 949 aa5.67□□□□□ -1.5
XRN1-211ENST00000477237 OR14I1A6ND48 311 aa5.66□□□□□ -1.5
XRN1-211ENST00000477237 SUV39H1O43463 412 aa5.66□□□□□ -1.5
XRN1-211ENST00000477237 GRK4P32298 578 aa5.66□□□□□ -1.5
XRN1-211ENST00000477237 SPPL2CQ8IUH8 684 aa5.66□□□□□ -1.5
XRN1-211ENST00000477237 SP8Q8IXZ3 490 aa5.66□□□□□ -1.5
XRN1-211ENST00000477237 DPH2Q9BQC3 489 aaPredicted RBP5.66□□□□□ -1.5
XRN1-211ENST00000477237 BDH2Q9BUT1 245 aa5.66□□□□□ -1.5
XRN1-211ENST00000477237 CYP8B1Q9UNU6 501 aa5.66□□□□□ -1.5
XRN1-211ENST00000477237 ZC3H12DA2A288 527 aaKnown RBP5.65□□□□□ -1.5
XRN1-211ENST00000477237 AKAP8O43823 692 aaKnown RBP5.65□□□□□ -1.5
XRN1-211ENST00000477237 EFEMP2O95967 443 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 LTKP29376 864 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 WIPI1Q5MNZ9 446 aaPredicted RBP5.65□□□□□ -1.5
XRN1-211ENST00000477237 ADGRF1Q5T601 910 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 PCNX4Q63HM2 1172 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 SIRT2Q8IXJ6 389 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 DMRTB1Q96MA1 342 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 GPR62Q9BZJ7 368 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 GPATCH2Q9NW75 528 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 MYRFQ9Y2G1 1151 aa5.65□□□□□ -1.5
XRN1-211ENST00000477237 NOTOA8MTQ0 251 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 N4BP3O15049 544 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 CELA3AP09093 270 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 ETV3P41162 512 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 CHRNEQ04844 493 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 HHIPL2Q6UWX4 724 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 FRMD5Q7Z6J6 570 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 TMEFF1Q8IYR6 380 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 DNAJB8Q8NHS0 232 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 GAL3ST3Q96A11 431 aa5.64□□□□□ -1.51
XRN1-211ENST00000477237 CNTD2Q9H8S5 307 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms