RNA–Protein interactions for RNA: ENST00000475881.5

PFKFB3-211, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 1 (best)

Gene PFKFB3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-211ENST00000475881 PDE1AP54750 535 aa20.53■□□□□ 0.88
PFKFB3-211ENST00000475881 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
PFKFB3-211ENST00000475881 ACER1Q8TDN7 264 aa20.53■□□□□ 0.88
PFKFB3-211ENST00000475881 KIAA1683Q9H0B3 1180 aa20.53■□□□□ 0.88
PFKFB3-211ENST00000475881 ARPP21Q9UBL0 812 aaPredicted RBP20.53■□□□□ 0.88
PFKFB3-211ENST00000475881 MYPNQ86TC9 1320 aa20.53■□□□□ 0.88
PFKFB3-211ENST00000475881 SMIM22K7EJ46 135 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 GNAT2P19087 354 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 CDK8P49336 464 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 FAM110CQ1W6H9 321 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 GIMAP6Q6P9H5 292 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 TMEM179Q6ZVK1 233 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 C16orf86Q6ZW13 317 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 RAET1EQ8TD07 263 aa20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 P2RX7Q99572 595 aaKnown RBP20.52■□□□□ 0.88
PFKFB3-211ENST00000475881 MGAMO43451 1857 aa20.52■□□□□ 0.87
PFKFB3-211ENST00000475881 C12orf42Q96LP6 360 aa20.51■□□□□ 0.87
PFKFB3-211ENST00000475881 CCDC17Q96LX7 622 aa20.51■□□□□ 0.87
PFKFB3-211ENST00000475881 CENPFP49454 3210 aa20.51■□□□□ 0.87
PFKFB3-211ENST00000475881 MYH8P13535 1937 aa20.51■□□□□ 0.87
PFKFB3-211ENST00000475881 TNPO2O14787 897 aaKnown RBP20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 APPP05067 770 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 AKR1B1P15121 316 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 HERVK_113P62684 666 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 PRKCZQ05513 592 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 SBK1Q52WX2 424 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 ZMYM1Q5SVZ6 1142 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 SH3TC2Q8TF17 1288 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 ZNF333Q96JL9 665 aa20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 SEC62Q99442 399 aaKnown RBP20.5■□□□□ 0.87
PFKFB3-211ENST00000475881 MINDY4BA8MYZ0 360 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L15C9J2P7 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L13C9JLJ4 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L11C9JVI0 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L18D6R9N7 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L22D6RA61 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L17D6RBQ6 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L19D6RCP7 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L20D6RJB6 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 TDO2P48775 406 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 USP17L24Q0WX57 530 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 CHD1LQ86WJ1 897 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 MORF4L1Q9UBU8 362 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
PFKFB3-211ENST00000475881 A0A1W2PRG0 241 aa20.48■□□□□ 0.87
PFKFB3-211ENST00000475881 PATL2C9JE40 543 aaKnown RBP20.48■□□□□ 0.87
PFKFB3-211ENST00000475881 NUCB1Q02818 461 aa20.48■□□□□ 0.87
PFKFB3-211ENST00000475881 COA7Q96BR5 231 aa20.48■□□□□ 0.87
PFKFB3-211ENST00000475881 EPB41L4AQ9HCS5 686 aaPredicted RBP20.48■□□□□ 0.87
PFKFB3-211ENST00000475881 VCAM1P19320 739 aa20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 GRK4P32298 578 aa20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 IFNL3Q8IZI9 196 aa20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 STK11IPQ8N1F8 1099 aa20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 GTF3C2Q8WUA4 911 aaPredicted RBP20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 TMEM106CQ9BVX2 250 aa20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 NACAP1Q9BZK3 213 aa20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 ARHGEF10LQ9HCE6 1279 aa20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 KIAA0100Q14667 2235 aaKnown RBP20.47■□□□□ 0.87
PFKFB3-211ENST00000475881 POTEFA5A3E0 1075 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 MYCP01106 439 aaPredicted RBP20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 FLT3LGP49771 235 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 ICA1Q05084 483 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 CATSPERGQ6ZRH7 1159 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 GPRC5AQ8NFJ5 357 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 RPAP3Q9H6T3 665 aaPredicted RBP20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 MKNK2Q9HBH9 465 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 TXNRD2Q9NNW7 524 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 RBPJLQ9UBG7 517 aa20.46■□□□□ 0.87
PFKFB3-211ENST00000475881 PEX10O60683 326 aa20.45■□□□□ 0.86
PFKFB3-211ENST00000475881 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
PFKFB3-211ENST00000475881 SIAH1Q8IUQ4 282 aa20.45■□□□□ 0.86
PFKFB3-211ENST00000475881 PAGR1Q9BTK6 254 aa20.45■□□□□ 0.86
PFKFB3-211ENST00000475881 SH2D4AQ9H788 454 aa20.45■□□□□ 0.86
PFKFB3-211ENST00000475881 BIN2Q9UBW5 565 aaPredicted RBP20.45■□□□□ 0.86
PFKFB3-211ENST00000475881 TRIM6-TRIM34B2RNG4 842 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 CCDC129Q6ZRS4 1044 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 PLEKHM2Q8IWE5 1019 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 SLAIN1Q8ND83 568 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 KANSL2Q9H9L4 492 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 TMX2Q9Y320 296 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 DOCK3Q8IZD9 2030 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 ROBO3Q96MS0 1386 aa20.44■□□□□ 0.86
PFKFB3-211ENST00000475881 ADCY3O60266 1144 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 RASA1P20936 1047 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 ERVK-9P63128 1117 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 ERVK-24P63145 666 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 ATP2B2Q01814 1243 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 IRF5Q13568 498 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 POTEEQ6S8J3 1075 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 RILPL2Q969X0 211 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 NAPBQ9H115 298 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 ZNF287Q9HBT7 754 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 HELLSQ9NRZ9 838 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 RABGAP1Q9Y3P9 1069 aa20.43■□□□□ 0.86
PFKFB3-211ENST00000475881 EEF2P13639 858 aaKnown RBP20.42■□□□□ 0.86
PFKFB3-211ENST00000475881 EN2P19622 333 aaPredicted RBP20.42■□□□□ 0.86
PFKFB3-211ENST00000475881 UBXN2AP68543 259 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms