RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 STK3Q13188 491 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 TTLL6Q8N841 843 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 ZC3H15Q8WU90 426 aaKnown RBP11.36□□□□□ -0.59
ITGA6-210ENST00000475302 CHAMP1Q96JM3 812 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 GBP4Q96PP9 640 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 PSMD1Q99460 953 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 MXD3Q9BW11 206 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
ITGA6-210ENST00000475302 DAGLAQ9Y4D2 1042 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 COL4A5P29400 1685 aa11.36□□□□□ -0.59
ITGA6-210ENST00000475302 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 MINDY4BA8MYZ0 360 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 BAG3O95817 575 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 USP17L8P0C7I0 530 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 BTDP43251 543 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 NTRK3Q16288 839 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 STRIP1Q5VSL9 837 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 HHIPL2Q6UWX4 724 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 CCDC102AQ96A19 550 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 NCOA5Q9HCD5 579 aaKnown RBP11.35□□□□□ -0.59
ITGA6-210ENST00000475302 LMBRD1Q9NUN5 540 aa11.35□□□□□ -0.59
ITGA6-210ENST00000475302 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
ITGA6-210ENST00000475302 BRCA1P38398 1863 aaKnown RBP11.35□□□□□ -0.59
ITGA6-210ENST00000475302 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 YDJCA8MPS7 323 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 C21orf2O43822 256 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 ECE2O60344 883 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 ZBTB7AO95365 584 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 F13A1P00488 732 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 CFHP08603 1231 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 NT5C2P49902 561 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 RCAN1P53805 252 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
ITGA6-210ENST00000475302 APOBEC3HQ6NTF7 200 aaKnown RBP11.34□□□□□ -0.59
ITGA6-210ENST00000475302 APOA5Q6Q788 366 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 ZNF516Q92618 1163 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 ANKS1AQ92625 1134 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
ITGA6-210ENST00000475302 DBNDD1Q9H9R9 158 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 PSME4Q14997 1843 aa11.34□□□□□ -0.59
ITGA6-210ENST00000475302 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 WDHD1O75717 1129 aaPredicted RBP11.33□□□□□ -0.6
ITGA6-210ENST00000475302 COPS2P61201 443 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 CCT2P78371 535 aaKnown RBP11.33□□□□□ -0.6
ITGA6-210ENST00000475302 FGD1P98174 961 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 LARP1BQ659C4 914 aaKnown RBP11.33□□□□□ -0.6
ITGA6-210ENST00000475302 RTKN2Q8IZC4 609 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 ESR2Q92731 530 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 VPS33BQ9H267 617 aa11.33□□□□□ -0.6
ITGA6-210ENST00000475302 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 ADAMTSL1Q8N6G6 1762 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 IFIT3O14879 490 aaKnown RBP11.32□□□□□ -0.6
ITGA6-210ENST00000475302 TRAK2O60296 914 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 ZMYND10O75800 440 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 PDCP20941 246 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 CDC27P30260 824 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 NOVP48745 357 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 PLCD1P51178 756 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 HMGN5P82970 282 aaKnown RBP11.32□□□□□ -0.6
ITGA6-210ENST00000475302 AOC3Q16853 763 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 CCDC93Q567U6 631 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 TMTC2Q8N394 836 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 ZDHHC15Q96MV8 337 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
ITGA6-210ENST00000475302 GMLQ99445 158 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 MCM9Q9NXL9 1143 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
ITGA6-210ENST00000475302 FLT1P17948 1338 aa11.32□□□□□ -0.6
ITGA6-210ENST00000475302 USP17L3A6NCW0 530 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 USP17L4A6NCW7 530 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 GOLGA8BA8MQT2 603 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 PRDM1O75626 825 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 ADD1P35611 737 aaKnown RBP11.31□□□□□ -0.6
ITGA6-210ENST00000475302 GABPAQ06546 454 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
ITGA6-210ENST00000475302 CDC42EP5Q6NZY7 148 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 USP17L1Q7RTZ2 530 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 ENAHQ8N8S7 591 aaPredicted RBP11.31□□□□□ -0.6
ITGA6-210ENST00000475302 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 ZKSCAN3Q9BRR0 538 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 IL17RBQ9NRM6 502 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 TCP11L1Q9NUJ3 509 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
ITGA6-210ENST00000475302 FER1L6Q2WGJ9 1857 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 ZBTB43O43298 467 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 DHX16O60231 1041 aaKnown RBP11.3□□□□□ -0.6
ITGA6-210ENST00000475302 RANBP6O60518 1105 aaKnown RBP11.3□□□□□ -0.6
ITGA6-210ENST00000475302 USP5P45974 858 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 CRKP46108 304 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms