RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 TCIRG1Q13488 830 aa15.55■□□□□ 0.08
SEMA4D-217ENST00000475255 NT5DC1Q5TFE4 455 aa15.55■□□□□ 0.08
SEMA4D-217ENST00000475255 HOMEZQ8IX15 550 aa15.55■□□□□ 0.08
SEMA4D-217ENST00000475255 CWC15Q9P013 229 aaKnown RBP15.55■□□□□ 0.08
SEMA4D-217ENST00000475255 RIPOR2Q9Y4F9 1068 aa15.55■□□□□ 0.08
SEMA4D-217ENST00000475255 MINDY4BA8MYZ0 360 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 IFNAR1P17181 557 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 RILPL1Q5EBL4 403 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 ATG3Q9NT62 314 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 SRPRBQ9Y5M8 271 aaKnown RBP15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 CUL4BQ13620 913 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 WTAPQ15007 396 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 MFSD6Q6ZSS7 791 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 RASGRP2Q7LDG7 609 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 NAPGQ99747 312 aaPredicted RBP15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 FAM204AQ9H8W3 233 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 TBC1D2BQ9UPU7 963 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 KRT31Q15323 416 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 HSP90B2PQ58FF3 399 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 SGMS1Q86VZ5 419 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
SEMA4D-217ENST00000475255 PPP1R3GB7ZBB8 358 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 MYO1BO43795 1136 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 ARHGAP25P42331 645 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 FKBP15Q5T1M5 1219 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 RRAGBQ5VZM2 374 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 LCORLQ8N3X6 602 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 CRACR2BQ8N4Y2 399 aaPredicted RBP15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 RIC1Q4ADV7 1423 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 WDR19Q8NEZ3 1342 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 ERLIN1O75477 346 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 KRT9P35527 623 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 MSANTD4Q8NCY6 345 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 RAB21Q9UL25 225 aa15.53■□□□□ 0.08
SEMA4D-217ENST00000475255 PBX1P40424 430 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 SLC20A2Q08357 652 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 FILIP1LQ4L180 1135 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 AKNAD1Q5T1N1 836 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 SLIT3O75094 1523 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 TCRBV5S4A2TA0A5A2 114 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 TRIM75PA6NK02 468 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 ERCC5P28715 1186 aaPredicted RBP15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 SDR42E1Q8WUS8 393 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.08
SEMA4D-217ENST00000475255 CYP2D7A0A087X1C5 515 aa15.52■□□□□ 0.07
SEMA4D-217ENST00000475255 GSG1L2A8MUP6 293 aa15.52■□□□□ 0.07
SEMA4D-217ENST00000475255 ADAMTS3O15072 1205 aa15.52■□□□□ 0.07
SEMA4D-217ENST00000475255 EIF3JO75822 258 aaKnown RBP15.52■□□□□ 0.07
SEMA4D-217ENST00000475255 ABHD10Q9NUJ1 306 aa15.52■□□□□ 0.07
SEMA4D-217ENST00000475255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.52■□□□□ 0.07
SEMA4D-217ENST00000475255 MYO6Q9UM54 1294 aa15.52■□□□□ 0.07
SEMA4D-217ENST00000475255 TRIM49BA6NDI0 452 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 UBE3CQ15386 1083 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 CDKAL1Q5VV42 579 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 LRRC31Q6UY01 552 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 TOM1L2Q6ZVM7 507 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 ZNF654Q8IZM8 581 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 FANCBQ8NB91 859 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 PLIN2Q99541 437 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 FOXP1Q9H334 677 aaPredicted RBP15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 GDAQ9Y2T3 454 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 V9GY48 417 aaPredicted RBP15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 PATL2C9JE40 543 aaKnown RBP15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 LIFRP42702 1097 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 MMS19Q96T76 1030 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 TSPYL1Q9H0U9 437 aa15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 REXO2Q9Y3B8 237 aaKnown RBP15.51■□□□□ 0.07
SEMA4D-217ENST00000475255 RNF40O75150 1001 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 PLEKHA8P1O95397 391 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 USP5P45974 858 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 RASGRF1Q13972 1273 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 TRIML1Q8N9V2 468 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 SPATA20Q8TB22 786 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 HNRNPLLQ8WVV9 542 aaKnown RBP15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 TJP1Q07157 1748 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 ECM29Q5VYK3 1845 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 ADAMTS7Q9UKP4 1686 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 ZNF185O15231 689 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 DEXIO95424 95 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 ATP1A1P05023 1023 aaKnown RBP15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 CNGA4Q8IV77 575 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 ZCRB1Q8TBF4 217 aaKnown RBP15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 WASF1Q92558 559 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 EHD4Q9H223 541 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 PSD3Q9NYI0 1048 aa15.5■□□□□ 0.07
SEMA4D-217ENST00000475255 ERICH2A1L162 156 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 VEGFAP15692 232 aaPredicted RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 EVX2Q03828 476 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 PACS2Q86VP3 889 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 POLD4Q9HCU8 107 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 ASAP1Q9ULH1 1129 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 XDHP47989 1333 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 ANKRD18BA2A2Z9 1011 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 EIF3CLB5ME19 914 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 PDE8BO95263 885 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 PCCAP05165 728 aaPredicted RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 UBXN1Q04323 297 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 SLC4A8Q2Y0W8 1093 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms