RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 KIF23Q02241 960 aaPredicted RBP4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 GRM1Q13255 1194 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 NMIQ13287 307 aaPredicted RBP4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 SNAPC2Q13487 334 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 CUL4AQ13619 759 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 ALX1Q15699 326 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 ZSCAN23Q3MJ62 389 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 SLFNL1Q499Z3 407 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 CTR9Q6PD62 1173 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 SDR42E1Q8WUS8 393 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 ZKSCAN4Q969J2 545 aaPredicted RBP4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 CLMNQ96JQ2 1002 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 CABP5Q9NP86 173 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 FZD1Q9UP38 647 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 ZMYM6O95789 1325 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 CCDC171Q6TFL3 1326 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 ATAD5Q96QE3 1844 aa4.91□□□□□ -1.62
GAPVD1-216ENST00000474637 TESPA1A2RU30 521 aaPredicted RBP4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 USP17L5A8MUK1 530 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 BRD1O95696 1058 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 TPM2P07951 284 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 ASNSP08243 561 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 PTPRAP18433 802 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 INPP5BP32019 993 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 NT5C2P49902 561 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 CERKLQ49MI3 558 aaPredicted RBP4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 C12orf60Q5U649 245 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 TATDN1Q6P1N9 297 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 C16orf86Q6ZW13 317 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 RASEFQ8IZ41 740 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 IFNL3Q8IZI9 196 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 NAPBQ9H115 298 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 ZCCHC17Q9NP64 241 aaKnown RBP4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 WBP1LQ9NX94 342 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 KCNH4Q9UQ05 1017 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 ROBO3Q96MS0 1386 aa4.9□□□□□ -1.62
GAPVD1-216ENST00000474637 A0A0D9SFI3 127 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L12C9JPN9 530 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L21D6R901 530 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 CHGBP05060 677 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 PLCD1P51178 756 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 ZNF445P59923 1031 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 GABPAQ06546 454 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 FASTKD5Q7L8L6 764 aaKnown RBP4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 OTUD5Q96G74 571 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 INTS4Q96HW7 963 aaKnown RBP4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 CCDC17Q96LX7 622 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 FAM227BQ96M60 508 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 LSG1Q9H089 658 aaKnown RBP4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 RBSNQ9H1K0 784 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 PRDM10Q9NQV6 1147 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 ZHX1Q9UKY1 873 aaPredicted RBP4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 SNX14Q9Y5W7 946 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 MYH8P13535 1937 aa4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 BAZ2AQ9UIF9 1905 aaKnown RBP4.9□□□□□ -1.63
GAPVD1-216ENST00000474637 DTNBO60941 627 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CPA1P15085 419 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 SHMT1P34896 483 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 GJA5P36382 358 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CDK8P49336 464 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 PDE4BQ07343 736 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 ABCB5Q2M3G0 1257 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 PPP4R3BQ5MIZ7 849 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 IFNL1Q8IU54 200 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 IFNLR1Q8IU57 520 aaPredicted RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 ANP32BQ92688 251 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 IL17RAQ96F46 866 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 SEC62Q99442 399 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 WDR18Q9BV38 432 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 DSCC1Q9BVC3 393 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CFHR5Q9BXR6 569 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 DNAJC18Q9H819 358 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 GDPD2Q9HCC8 539 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 TMEM63CQ9P1W3 806 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CTNNA3Q9UI47 895 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 AFG3L2Q9Y4W6 797 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 ZHX2Q9Y6X8 837 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 PHIPQ8WWQ0 1821 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CCL15-CCL14A0A0B4J2E2 113 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 A0A0G2JLL6 359 aaPredicted RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 SYCE3A1L190 88 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 MINDY4BA8MYZ0 360 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 C19orf81C9J6K1 198 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 EPB41L2O43491 1005 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 HSPA1AP0DMV8 641 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 HSPA1BP0DMV9 641 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CYP2D6P10635 497 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 HSPD1P10809 573 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 PCP11498 1178 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CTCFP49711 727 aaPredicted RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 AK2P54819 239 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 FGD1P98174 961 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 PTH1RQ03431 593 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 PPARAQ07869 468 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 MKRN3Q13064 507 aaKnown RBP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 PABPC4Q13310 644 aaKnown RBP eCLIP4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CCL15Q16663 113 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 TPRNQ4KMQ1 711 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
GAPVD1-216ENST00000474637 TMEM179Q6ZVK1 233 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms